Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC28A2O43868 RRP7BP-205ENST00000566851 833 ntBASIC14.81□□□□□ -0.04
SLC28A2O43868 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC28A2O43868 AC010328.2-201ENST00000597698 1111 ntBASIC14.81□□□□□ -0.04
SLC28A2O43868 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC28A2O43868 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC28A2O43868 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC28A2O43868 AL033527.5-202ENST00000641632 1098 ntBASIC14.81□□□□□ -0.04
SLC28A2O43868 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A2O43868 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A2O43868 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A2O43868 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A2O43868 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SLC28A2O43868 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A2O43868 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A2O43868 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A2O43868 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
SLC28A2O43868 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A2O43868 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A2O43868 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SLC28A2O43868 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SLC28A2O43868 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A2O43868 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC28A2O43868 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC28A2O43868 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SLC28A2O43868 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SLC28A2O43868 AC127383.1-201ENST00000444697 1800 ntBASIC14.8□□□□□ -0.04
SLC28A2O43868 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A2O43868 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC28A2O43868 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC28A2O43868 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
SLC28A2O43868 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A2O43868 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A2O43868 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A2O43868 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A2O43868 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SLC28A2O43868 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.8□□□□□ -0.04
SLC28A2O43868 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC28A2O43868 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A2O43868 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SLC28A2O43868 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A2O43868 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC28A2O43868 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A2O43868 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC28A2O43868 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.8□□□□□ -0.04
SLC28A2O43868 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.8□□□□□ -0.04
SLC28A2O43868 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.8□□□□□ -0.04
SLC28A2O43868 PHKG1P2-201ENST00000457537 863 ntBASIC14.8□□□□□ -0.04
SLC28A2O43868 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A2O43868 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.8□□□□□ -0.04
SLC28A2O43868 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.8□□□□□ -0.04
SLC28A2O43868 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SLC28A2O43868 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC28A2O43868 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.8□□□□□ -0.04
SLC28A2O43868 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.8□□□□□ -0.04
SLC28A2O43868 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC28A2O43868 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.8□□□□□ -0.04
SLC28A2O43868 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC28A2O43868 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A2O43868 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A2O43868 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A2O43868 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A2O43868 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A2O43868 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.8□□□□□ -0.04
SLC28A2O43868 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC28A2O43868 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC28A2O43868 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC28A2O43868 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A2O43868 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A2O43868 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A2O43868 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC28A2O43868 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.79□□□□□ -0.04
SLC28A2O43868 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SLC28A2O43868 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
SLC28A2O43868 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SLC28A2O43868 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC28A2O43868 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC28A2O43868 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.79□□□□□ -0.04
SLC28A2O43868 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC28A2O43868 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.79□□□□□ -0.04
SLC28A2O43868 TNRC18P2-201ENST00000417666 2714 ntBASIC14.79□□□□□ -0.04
SLC28A2O43868 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC28A2O43868 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC28A2O43868 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC28A2O43868 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms