Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.68□□□□□ -0.54
COLCA2A8K830 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COLCA2A8K830 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COLCA2A8K830 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC11.68□□□□□ -0.54
COLCA2A8K830 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COLCA2A8K830 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC11.68□□□□□ -0.54
COLCA2A8K830 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
COLCA2A8K830 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
COLCA2A8K830 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
COLCA2A8K830 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
COLCA2A8K830 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COLCA2A8K830 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
COLCA2A8K830 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
COLCA2A8K830 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
COLCA2A8K830 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC11.68□□□□□ -0.54
COLCA2A8K830 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
COLCA2A8K830 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC11.67□□□□□ -0.54
COLCA2A8K830 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
COLCA2A8K830 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC11.67□□□□□ -0.54
COLCA2A8K830 AP003969.2-201ENST00000623739 2275 ntBASIC11.67□□□□□ -0.54
COLCA2A8K830 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.67□□□□□ -0.54
COLCA2A8K830 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 HNRNPMP1-201ENST00000560685 1768 ntBASIC11.67□□□□□ -0.54
COLCA2A8K830 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 PCDHA6-201ENST00000378126 3267 ntBASIC11.67□□□□□ -0.54
COLCA2A8K830 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC11.67□□□□□ -0.54
COLCA2A8K830 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC11.67□□□□□ -0.54
COLCA2A8K830 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
COLCA2A8K830 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 CTNS-203ENST00000399306 803 ntTSL 3 BASIC11.67□□□□□ -0.54
COLCA2A8K830 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.67□□□□□ -0.54
COLCA2A8K830 CDCA4P2-201ENST00000441182 718 ntBASIC11.67□□□□□ -0.54
COLCA2A8K830 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC11.67□□□□□ -0.54
COLCA2A8K830 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.67□□□□□ -0.54
COLCA2A8K830 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC11.67□□□□□ -0.54
COLCA2A8K830 CD320-202ENST00000537716 1119 ntTSL 2 BASIC11.67□□□□□ -0.54
COLCA2A8K830 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11.67□□□□□ -0.54
COLCA2A8K830 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 AC097493.4-201ENST00000641197 219 ntBASIC11.67□□□□□ -0.54
COLCA2A8K830 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
COLCA2A8K830 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
COLCA2A8K830 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.67□□□□□ -0.54
COLCA2A8K830 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC11.67□□□□□ -0.54
COLCA2A8K830 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 AC126564.1-201ENST00000623628 2013 ntBASIC11.67□□□□□ -0.54
COLCA2A8K830 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC11.67□□□□□ -0.54
COLCA2A8K830 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC11.67□□□□□ -0.54
COLCA2A8K830 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.67□□□□□ -0.54
COLCA2A8K830 AC084364.1-201ENST00000551967 1556 ntBASIC11.67□□□□□ -0.54
COLCA2A8K830 MEX3B-202ENST00000558133 4333 ntBASIC11.67□□□□□ -0.54
COLCA2A8K830 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
COLCA2A8K830 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
COLCA2A8K830 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC11.66□□□□□ -0.54
COLCA2A8K830 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
COLCA2A8K830 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
COLCA2A8K830 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.66□□□□□ -0.54
COLCA2A8K830 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
COLCA2A8K830 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC11.66□□□□□ -0.54
COLCA2A8K830 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
COLCA2A8K830 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
COLCA2A8K830 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
COLCA2A8K830 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
COLCA2A8K830 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC11.66□□□□□ -0.54
COLCA2A8K830 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
COLCA2A8K830 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.66□□□□□ -0.54
COLCA2A8K830 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC11.66□□□□□ -0.54
COLCA2A8K830 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
COLCA2A8K830 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms