Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 MED15P5-201ENST00000423150 992 ntBASIC16.68■□□□□ 0.26
CCDC66A2RUB6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.68■□□□□ 0.26
CCDC66A2RUB6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 AL450472.2-201ENST00000603663 1156 ntBASIC16.68■□□□□ 0.26
CCDC66A2RUB6 AC140113.2-201ENST00000604370 208 ntBASIC16.68■□□□□ 0.26
CCDC66A2RUB6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC66A2RUB6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 MIR346-201ENST00000362234 95 ntBASIC16.67■□□□□ 0.26
CCDC66A2RUB6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 HLA-H-201ENST00000383620 1096 ntBASIC16.67■□□□□ 0.26
CCDC66A2RUB6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 MIR940-201ENST00000401276 94 ntBASIC16.67■□□□□ 0.26
CCDC66A2RUB6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 AL139010.1-201ENST00000454878 894 ntBASIC16.67■□□□□ 0.26
CCDC66A2RUB6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms