Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 AC003102.2-201ENST00000589195 1469 ntBASIC20.67■□□□□ 0.9
NINLQ9Y2I6 AC132872.4-202ENST00000622924 2756 ntBASIC20.67■□□□□ 0.9
NINLQ9Y2I6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 SMS-201ENST00000379404 1174 ntTSL 3 BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 LBH-202ENST00000401506 485 ntTSL 3 BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 AC100850.1-201ENST00000506768 649 ntBASIC20.67■□□□□ 0.9
NINLQ9Y2I6 SCARNA20.5-201ENST00000516991 142 ntBASIC20.67■□□□□ 0.9
NINLQ9Y2I6 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 AC009955.4-201ENST00000597192 544 ntBASIC20.67■□□□□ 0.9
NINLQ9Y2I6 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 PAUPAR-201ENST00000630360 2965 ntBASIC20.67■□□□□ 0.9
NINLQ9Y2I6 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 HNRNPA1P32-201ENST00000396326 963 ntBASIC20.66■□□□□ 0.9
NINLQ9Y2I6 AL662890.1-201ENST00000396818 632 ntBASIC20.66■□□□□ 0.9
NINLQ9Y2I6 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 ACTG1P17-201ENST00000558391 1119 ntBASIC20.66■□□□□ 0.9
NINLQ9Y2I6 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 KRT8P19-201ENST00000551916 1455 ntBASIC20.66■□□□□ 0.9
NINLQ9Y2I6 AC138028.6-201ENST00000616106 1482 ntBASIC20.66■□□□□ 0.9
NINLQ9Y2I6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC20.66■□□□□ 0.9
NINLQ9Y2I6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 MIR4683-201ENST00000579659 81 ntBASIC20.65■□□□□ 0.9
NINLQ9Y2I6 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NINLQ9Y2I6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
NINLQ9Y2I6 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC20.64■□□□□ 0.9
NINLQ9Y2I6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms