Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC134312.5-201ENST00000568031 1313 ntBASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 AC127383.1-201ENST00000444697 1800 ntBASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 AC090616.6-203ENST00000579186 1945 ntBASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 FAM86MP-201ENST00000340703 885 ntBASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 AC007551.1-201ENST00000457394 519 ntBASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 AP001063.1-201ENST00000568332 529 ntBASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 CLUHP6-201ENST00000580789 941 ntBASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 RN7SL219P-201ENST00000582872 296 ntBASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA1Q9UND3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
NPIPA1Q9UND3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
NPIPA1Q9UND3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
NPIPA1Q9UND3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 AC093433.1-201ENST00000458048 571 ntBASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms