Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 AC079178.1-201ENST00000420915 656 ntBASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 RPS2P32-201ENST00000439199 892 ntBASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 HOMER2P2-201ENST00000451621 847 ntBASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 AC022494.1-201ENST00000466044 728 ntBASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 MIR4783-201ENST00000580343 82 ntBASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC20.27■□□□□ 0.83
NPC1L1Q9UHC9 AC011270.2-201ENST00000624293 2550 ntBASIC20.27■□□□□ 0.83
NPC1L1Q9UHC9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
NPC1L1Q9UHC9 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
NPC1L1Q9UHC9 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NPC1L1Q9UHC9 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NPC1L1Q9UHC9 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NPC1L1Q9UHC9 MX1-218ENST00000619682 1980 ntTSL 5 BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 FAM21FP-201ENST00000426241 1131 ntBASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 CYGB-203ENST00000589145 788 ntTSL 3 BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 AL033527.4-201ENST00000641026 673 ntBASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 CICP14-201ENST00000629111 2732 ntBASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NPC1L1Q9UHC9 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 PUDPP3-201ENST00000445368 636 ntBASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 HSPB1P2-201ENST00000448722 546 ntBASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 AL390755.1-201ENST00000623716 2027 ntBASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NPC1L1Q9UHC9 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 AC009542.2-202ENST00000619004 1067 ntBASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms