Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.93■□□□□ 0.3
BLOC1S4Q9NUP1 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BLOC1S4Q9NUP1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BLOC1S4Q9NUP1 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
BLOC1S4Q9NUP1 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BLOC1S4Q9NUP1 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
BLOC1S4Q9NUP1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BLOC1S4Q9NUP1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BLOC1S4Q9NUP1 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BLOC1S4Q9NUP1 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 LINC00552-201ENST00000625151 2579 ntBASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 RN7SL692P-201ENST00000464677 288 ntBASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 AC004466.1-201ENST00000599515 1080 ntBASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 AC055811.4-201ENST00000624039 1754 ntBASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
BLOC1S4Q9NUP1 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 AC012441.1-201ENST00000446669 685 ntBASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 GIMAP3P-201ENST00000495150 836 ntBASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 AC009486.1-201ENST00000569860 813 ntBASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 KRT8P35-201ENST00000483942 1338 ntBASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BLOC1S4Q9NUP1 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms