Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CISHQ9NSE2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CISHQ9NSE2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CISHQ9NSE2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CISHQ9NSE2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CISHQ9NSE2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CISHQ9NSE2 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CISHQ9NSE2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CISHQ9NSE2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CISHQ9NSE2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CISHQ9NSE2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CISHQ9NSE2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CISHQ9NSE2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CISHQ9NSE2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CISHQ9NSE2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CISHQ9NSE2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CISHQ9NSE2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.27■□□□□ 0.2
CISHQ9NSE2 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CISHQ9NSE2 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CISHQ9NSE2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CISHQ9NSE2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.27■□□□□ 0.2
CISHQ9NSE2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.27■□□□□ 0.2
CISHQ9NSE2 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CISHQ9NSE2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CISHQ9NSE2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.27■□□□□ 0.2
CISHQ9NSE2 BAATP1-201ENST00000412284 1225 ntBASIC16.27■□□□□ 0.2
CISHQ9NSE2 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.27■□□□□ 0.2
CISHQ9NSE2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CISHQ9NSE2 AC007389.4-201ENST00000454674 793 ntBASIC16.27■□□□□ 0.2
CISHQ9NSE2 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.27■□□□□ 0.2
CISHQ9NSE2 KRT18P25-201ENST00000508931 1278 ntBASIC16.27■□□□□ 0.2
CISHQ9NSE2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CISHQ9NSE2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CISHQ9NSE2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CISHQ9NSE2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CISHQ9NSE2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.27■□□□□ 0.19
CISHQ9NSE2 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CISHQ9NSE2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.27■□□□□ 0.19
CISHQ9NSE2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.27■□□□□ 0.19
CISHQ9NSE2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.27■□□□□ 0.19
CISHQ9NSE2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CISHQ9NSE2 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CISHQ9NSE2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.27■□□□□ 0.19
CISHQ9NSE2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CISHQ9NSE2 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CISHQ9NSE2 AC011270.2-201ENST00000624293 2550 ntBASIC16.27■□□□□ 0.19
CISHQ9NSE2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CISHQ9NSE2 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 AC134312.5-201ENST00000568031 1313 ntBASIC16.26■□□□□ 0.19
CISHQ9NSE2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 ACTBP8-201ENST00000403258 1108 ntBASIC16.26■□□□□ 0.19
CISHQ9NSE2 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 AC012441.1-201ENST00000446669 685 ntBASIC16.26■□□□□ 0.19
CISHQ9NSE2 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 PTP4A1P2-201ENST00000546033 454 ntBASIC16.26■□□□□ 0.19
CISHQ9NSE2 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 AC012645.4-201ENST00000610691 1061 ntBASIC16.26■□□□□ 0.19
CISHQ9NSE2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CISHQ9NSE2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CISHQ9NSE2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CISHQ9NSE2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CISHQ9NSE2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms