Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 TNRC18P2-201ENST00000417666 2714 ntBASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 CRB3P1-201ENST00000449338 276 ntBASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 AC007326.2-201ENST00000624224 7579 ntBASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 ACE3P-201ENST00000423435 1973 ntBASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN4Q9NRR5 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 AL359258.3-201ENST00000622910 2331 ntBASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms