Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AL161670.2-201ENST00000557650 1227 ntBASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 OR10B1P-201ENST00000601666 907 ntBASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 REXO1L5P-201ENST00000622260 2098 ntBASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 KRT8P4-201ENST00000509735 1454 ntBASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 AC013268.4-201ENST00000637413 2228 ntBASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 AP000845.1-201ENST00000581677 2131 ntBASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 AL157414.3-201ENST00000624276 1954 ntBASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 DPM3-202ENST00000368399 517 ntBASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 AC012508.2-201ENST00000567613 1472 ntBASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PDLIM7Q9NR12 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDLIM7Q9NR12 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDLIM7Q9NR12 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
PDLIM7Q9NR12 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDLIM7Q9NR12 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
PDLIM7Q9NR12 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.89■□□□□ 0.3
PDLIM7Q9NR12 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDLIM7Q9NR12 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.89■□□□□ 0.3
PDLIM7Q9NR12 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.89■□□□□ 0.3
PDLIM7Q9NR12 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDLIM7Q9NR12 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 AC114501.1-201ENST00000445949 172 ntBASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 AC234782.1-201ENST00000451950 919 ntBASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 AC100850.1-201ENST00000506768 649 ntBASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 AC013355.1-201ENST00000562625 723 ntBASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms