Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 AL512638.1-201ENST00000457493 794 ntBASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 AL844908.2-201ENST00000609461 460 ntBASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 BTBD7P1-201ENST00000447253 1453 ntBASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 DUX4L27-201ENST00000554796 1261 ntBASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC68Q9H2F9 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms