Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 FP325330.2-201ENST00000624219 5630 ntBASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 AL031133.1-201ENST00000406807 723 ntBASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 FAM185BP-201ENST00000443595 716 ntBASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 AL031432.2-201ENST00000566714 459 ntBASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 AL928711.1-201ENST00000570165 459 ntBASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 AC008667.4-201ENST00000607370 168 ntBASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 AL355877.3-201ENST00000622820 899 ntBASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 AC105206.1-202ENST00000314927 2368 ntBASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM3Q9BZL3 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 MRPL20P1-201ENST00000400819 433 ntBASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 AC025062.2-201ENST00000605477 670 ntBASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms