Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
HERPUD2Q9BSE4 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERPUD2Q9BSE4 AC023090.2-201ENST00000625182 2110 ntBASIC15.83■□□□□ 0.12
HERPUD2Q9BSE4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERPUD2Q9BSE4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HERPUD2Q9BSE4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.83■□□□□ 0.12
HERPUD2Q9BSE4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERPUD2Q9BSE4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERPUD2Q9BSE4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HERPUD2Q9BSE4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.83■□□□□ 0.12
HERPUD2Q9BSE4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.83■□□□□ 0.12
HERPUD2Q9BSE4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 TSPY16P-201ENST00000449843 468 ntBASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 AC135586.1-201ENST00000539323 574 ntBASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 AC104794.3-201ENST00000566840 1248 ntBASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERPUD2Q9BSE4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 AL353779.1-201ENST00000434793 351 ntBASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 BTBD7P1-201ENST00000447253 1453 ntBASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 AC023310.3-201ENST00000557027 670 ntBASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 AC100756.1-201ENST00000562736 682 ntBASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 AC138749.3-201ENST00000567691 622 ntBASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 AC107373.2-201ENST00000607735 490 ntBASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 AC116165.1-201ENST00000611806 668 ntBASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 AL137783.1-201ENST00000623494 1896 ntBASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HERPUD2Q9BSE4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms