Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 AC093813.1-201ENST00000605066 256 ntBASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 AC093726.1-201ENST00000608064 963 ntBASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 AL138799.1-201ENST00000448213 1675 ntBASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.29□□□□□ -0.12
MS4A4EQ96PG1 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 AL645937.2-201ENST00000396808 931 ntBASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 LILRP1-201ENST00000444199 1370 ntBASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 SERBP1P5-201ENST00000510079 1181 ntBASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 AL360270.3-201ENST00000609118 1348 ntBASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MS4A4EQ96PG1 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MS4A4EQ96PG1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.27□□□□□ -0.12
MS4A4EQ96PG1 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.27□□□□□ -0.12
MS4A4EQ96PG1 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MS4A4EQ96PG1 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MS4A4EQ96PG1 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MS4A4EQ96PG1 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
MS4A4EQ96PG1 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MS4A4EQ96PG1 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MS4A4EQ96PG1 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MS4A4EQ96PG1 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MS4A4EQ96PG1 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
MS4A4EQ96PG1 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MS4A4EQ96PG1 AL391825.1-201ENST00000457671 1364 ntBASIC14.27□□□□□ -0.12
MS4A4EQ96PG1 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MS4A4EQ96PG1 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MS4A4EQ96PG1 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MS4A4EQ96PG1 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MS4A4EQ96PG1 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.27□□□□□ -0.13
MS4A4EQ96PG1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
MS4A4EQ96PG1 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms