Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 AL512361.1-201ENST00000554200 418 ntBASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 MTDHP5-201ENST00000598980 586 ntBASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 MIR6080-201ENST00000617359 66 ntBASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CHAMP1Q96JM3 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 AC152010.1-201ENST00000415779 2006 ntBASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 AL121723.1-201ENST00000445194 1519 ntBASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 AC005829.1-201ENST00000570002 483 ntBASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms