Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.41■□□□□ 0.38
ERCC4Q92889 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ERCC4Q92889 REXO1L4P-201ENST00000605109 1937 ntBASIC17.41■□□□□ 0.38
ERCC4Q92889 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.41■□□□□ 0.38
ERCC4Q92889 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.41■□□□□ 0.38
ERCC4Q92889 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.41■□□□□ 0.38
ERCC4Q92889 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.41■□□□□ 0.38
ERCC4Q92889 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.41■□□□□ 0.38
ERCC4Q92889 RPL5P21-201ENST00000404620 815 ntBASIC17.41■□□□□ 0.38
ERCC4Q92889 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.41■□□□□ 0.38
ERCC4Q92889 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 AC025048.3-201ENST00000590609 569 ntBASIC17.41■□□□□ 0.38
ERCC4Q92889 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.41■□□□□ 0.38
ERCC4Q92889 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
ERCC4Q92889 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 AC027612.4-201ENST00000605371 583 ntBASIC17.41■□□□□ 0.38
ERCC4Q92889 GPALPP1-207ENST00000611650 899 ntBASIC17.41■□□□□ 0.38
ERCC4Q92889 AC006538.3-201ENST00000612495 578 ntBASIC17.41■□□□□ 0.38
ERCC4Q92889 AC005702.4-201ENST00000618393 416 ntBASIC17.41■□□□□ 0.38
ERCC4Q92889 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.41■□□□□ 0.38
ERCC4Q92889 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ERCC4Q92889 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.41■□□□□ 0.38
ERCC4Q92889 AC067750.1-201ENST00000608826 6545 ntBASIC17.41■□□□□ 0.38
ERCC4Q92889 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 AP001267.2-201ENST00000532619 2086 ntBASIC17.41■□□□□ 0.38
ERCC4Q92889 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
ERCC4Q92889 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.41■□□□□ 0.38
ERCC4Q92889 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC4Q92889 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ERCC4Q92889 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.4■□□□□ 0.38
ERCC4Q92889 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
ERCC4Q92889 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.4■□□□□ 0.38
ERCC4Q92889 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.4■□□□□ 0.38
ERCC4Q92889 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ERCC4Q92889 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ERCC4Q92889 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 SLED1-202ENST00000512051 380 ntBASIC17.4■□□□□ 0.38
ERCC4Q92889 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.4■□□□□ 0.38
ERCC4Q92889 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.4■□□□□ 0.38
ERCC4Q92889 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.4■□□□□ 0.38
ERCC4Q92889 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.4■□□□□ 0.38
ERCC4Q92889 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 AL035456.1-201ENST00000456064 1369 ntBASIC17.4■□□□□ 0.38
ERCC4Q92889 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC4Q92889 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ERCC4Q92889 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ERCC4Q92889 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ERCC4Q92889 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ERCC4Q92889 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ERCC4Q92889 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC4Q92889 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
ERCC4Q92889 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC4Q92889 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC4Q92889 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ERCC4Q92889 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.39■□□□□ 0.37
ERCC4Q92889 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC4Q92889 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC4Q92889 UPF3AP3-201ENST00000420996 769 ntBASIC17.39■□□□□ 0.37
ERCC4Q92889 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.39■□□□□ 0.37
ERCC4Q92889 AL512361.1-201ENST00000554200 418 ntBASIC17.39■□□□□ 0.37
ERCC4Q92889 AC015910.1-201ENST00000579400 975 ntBASIC17.39■□□□□ 0.37
ERCC4Q92889 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.39■□□□□ 0.37
ERCC4Q92889 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms