Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 AC133552.6-201ENST00000613406 534 ntBASIC15.27■□□□□ 0.04
CHD5Q8TDI0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 PKD1P5-201ENST00000532415 10291 ntBASIC15.27■□□□□ 0.04
CHD5Q8TDI0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHD5Q8TDI0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 HIST2H2BB-201ENST00000449108 381 ntBASIC15.27■□□□□ 0.03
CHD5Q8TDI0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 AC100850.1-201ENST00000506768 649 ntBASIC15.27■□□□□ 0.03
CHD5Q8TDI0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHD5Q8TDI0 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 FGD5P1-202ENST00000614866 2498 ntBASIC15.26■□□□□ 0.03
CHD5Q8TDI0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 AC103702.1-201ENST00000548801 2630 ntBASIC15.26■□□□□ 0.03
CHD5Q8TDI0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CHD5Q8TDI0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHD5Q8TDI0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHD5Q8TDI0 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHD5Q8TDI0 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHD5Q8TDI0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHD5Q8TDI0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHD5Q8TDI0 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.25■□□□□ 0.03
CHD5Q8TDI0 HLA-V-201ENST00000429037 534 ntBASIC15.25■□□□□ 0.03
CHD5Q8TDI0 HOMER2P2-201ENST00000451621 847 ntBASIC15.25■□□□□ 0.03
CHD5Q8TDI0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms