Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 USP32P1-208ENST00000506594 1164 ntBASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 AP001582.1-201ENST00000525856 295 ntBASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 PTP4A1P2-201ENST00000546033 454 ntBASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 RAB43P1-201ENST00000561790 589 ntBASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 AP001063.1-201ENST00000568332 529 ntBASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 AC009486.1-201ENST00000569860 813 ntBASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 LINC02228-204ENST00000642115 2962 ntBASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 AL138799.1-201ENST00000448213 1675 ntBASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 AC090616.6-203ENST00000579186 1945 ntBASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 AC112492.5-201ENST00000421897 457 ntBASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 AC068587.3-201ENST00000526613 355 ntBASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 SLC25A47P1-201ENST00000531577 414 ntBASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 AC106886.1-201ENST00000568660 600 ntBASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 BTNL10-201ENST00000595971 695 ntBASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 AC233724.13-201ENST00000598383 410 ntBASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FNDC9Q8TBE3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 MSTO2P-201ENST00000314835 1709 ntBASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms