Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
LTBP4Q8N2S1 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LTBP4Q8N2S1 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LTBP4Q8N2S1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LTBP4Q8N2S1 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LTBP4Q8N2S1 PPP1R2P4-201ENST00000424051 595 ntBASIC20.32■□□□□ 0.84
LTBP4Q8N2S1 HNRNPA3P6-201ENST00000472163 1006 ntBASIC20.32■□□□□ 0.84
LTBP4Q8N2S1 RN7SL363P-201ENST00000482412 273 ntBASIC20.32■□□□□ 0.84
LTBP4Q8N2S1 IFNL3P1-201ENST00000595082 501 ntBASIC20.32■□□□□ 0.84
LTBP4Q8N2S1 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LTBP4Q8N2S1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
LTBP4Q8N2S1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LTBP4Q8N2S1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LTBP4Q8N2S1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
LTBP4Q8N2S1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LTBP4Q8N2S1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.32■□□□□ 0.84
LTBP4Q8N2S1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LTBP4Q8N2S1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LTBP4Q8N2S1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
LTBP4Q8N2S1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 CDKN2A-AS1-201ENST00000441769 823 ntBASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 RN7SL672P-201ENST00000474091 317 ntBASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 SNORD3B-1-201ENST00000577988 758 ntBASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 CLPP-205ENST00000596605 646 ntTSL 2 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 AC010531.8-201ENST00000623341 685 ntBASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 URAHP-205ENST00000610227 398 ntBASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 Z82244.2-201ENST00000632196 448 ntBASIC20.31■□□□□ 0.84
LTBP4Q8N2S1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 TNRC18P3-201ENST00000441896 2691 ntBASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 HNRNPABP1-201ENST00000406003 734 ntBASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LTBP4Q8N2S1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 AC013726.1-201ENST00000563747 2285 ntBASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 AL590440.2-201ENST00000641973 1595 ntBASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 AL390961.4-201ENST00000623958 2535 ntBASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 SIRPB3P-201ENST00000340424 1216 ntBASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 MIR1226-201ENST00000408658 75 ntBASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 HNRNPA1P21-201ENST00000424115 961 ntBASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 ST13P19-201ENST00000442505 1124 ntBASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 AL132994.1-201ENST00000554098 400 ntBASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms