Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC012618.1-201ENST00000461223 412 ntBASIC15.69■□□□□ 0.1
SIX5Q8N196 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.69■□□□□ 0.1
SIX5Q8N196 MIR3147-201ENST00000577811 66 ntBASIC15.69■□□□□ 0.1
SIX5Q8N196 RN7SL713P-201ENST00000582127 302 ntBASIC15.69■□□□□ 0.1
SIX5Q8N196 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.69■□□□□ 0.1
SIX5Q8N196 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.69■□□□□ 0.1
SIX5Q8N196 OR10B1P-201ENST00000601666 907 ntBASIC15.69■□□□□ 0.1
SIX5Q8N196 AC018635.2-201ENST00000608625 364 ntBASIC15.69■□□□□ 0.1
SIX5Q8N196 AC100757.4-201ENST00000626934 759 ntBASIC15.69■□□□□ 0.1
SIX5Q8N196 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.69■□□□□ 0.1
SIX5Q8N196 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX5Q8N196 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX5Q8N196 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.69■□□□□ 0.1
SIX5Q8N196 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX5Q8N196 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX5Q8N196 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SIX5Q8N196 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.69■□□□□ 0.1
SIX5Q8N196 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX5Q8N196 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SIX5Q8N196 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX5Q8N196 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX5Q8N196 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX5Q8N196 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.69■□□□□ 0.1
SIX5Q8N196 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX5Q8N196 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SIX5Q8N196 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SIX5Q8N196 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.68■□□□□ 0.1
SIX5Q8N196 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
SIX5Q8N196 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.68■□□□□ 0.1
SIX5Q8N196 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SIX5Q8N196 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SIX5Q8N196 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.68■□□□□ 0.1
SIX5Q8N196 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.68■□□□□ 0.1
SIX5Q8N196 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SIX5Q8N196 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SIX5Q8N196 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.68■□□□□ 0.1
SIX5Q8N196 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.68■□□□□ 0.1
SIX5Q8N196 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SIX5Q8N196 AL355334.1-201ENST00000417713 215 ntBASIC15.68■□□□□ 0.1
SIX5Q8N196 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.68■□□□□ 0.1
SIX5Q8N196 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
SIX5Q8N196 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC15.68■□□□□ 0.1
SIX5Q8N196 RN7SL555P-201ENST00000584742 339 ntBASIC15.68■□□□□ 0.1
SIX5Q8N196 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.68■□□□□ 0.1
SIX5Q8N196 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.68■□□□□ 0.1
SIX5Q8N196 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.68■□□□□ 0.1
SIX5Q8N196 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 AP000346.4-201ENST00000614827 381 ntBASIC15.68■□□□□ 0.1
SIX5Q8N196 AP001002.3-201ENST00000623482 206 ntBASIC15.68■□□□□ 0.1
SIX5Q8N196 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SIX5Q8N196 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.68■□□□□ 0.1
SIX5Q8N196 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
SIX5Q8N196 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.68■□□□□ 0.1
SIX5Q8N196 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 PCDHB19P-201ENST00000570871 2371 ntBASIC15.68■□□□□ 0.1
SIX5Q8N196 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SIX5Q8N196 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX5Q8N196 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SIX5Q8N196 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SIX5Q8N196 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.67■□□□□ 0.1
SIX5Q8N196 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SIX5Q8N196 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SIX5Q8N196 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIX5Q8N196 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.67■□□□□ 0.1
SIX5Q8N196 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.67■□□□□ 0.1
SIX5Q8N196 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIX5Q8N196 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SIX5Q8N196 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.67■□□□□ 0.1
SIX5Q8N196 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SIX5Q8N196 AC104784.1-201ENST00000473096 294 ntBASIC15.67■□□□□ 0.1
SIX5Q8N196 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.67■□□□□ 0.1
SIX5Q8N196 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.67■□□□□ 0.1
SIX5Q8N196 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.67■□□□□ 0.1
SIX5Q8N196 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.67■□□□□ 0.1
SIX5Q8N196 AC073413.1-201ENST00000603927 732 ntBASIC15.67■□□□□ 0.1
SIX5Q8N196 AC026740.1-201ENST00000607068 791 ntBASIC15.67■□□□□ 0.1
SIX5Q8N196 ZACNP1-201ENST00000612259 710 ntBASIC15.67■□□□□ 0.1
SIX5Q8N196 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.67■□□□□ 0.1
SIX5Q8N196 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms