Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 FTLP1-201ENST00000449155 526 ntBASIC16.26■□□□□ 0.19
RNF135Q8IUD6 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.25■□□□□ 0.19
RNF135Q8IUD6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 CYP46A4P-201ENST00000414953 267 ntBASIC16.25■□□□□ 0.19
RNF135Q8IUD6 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 AL133466.1-201ENST00000447582 150 ntBASIC16.25■□□□□ 0.19
RNF135Q8IUD6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF135Q8IUD6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 RN7SL832P-201ENST00000607781 1756 ntBASIC16.24■□□□□ 0.19
RNF135Q8IUD6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms