Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AL355334.1-201ENST00000417713 215 ntBASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 AC078991.1-201ENST00000437297 610 ntBASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 RN7SL818P-201ENST00000485099 259 ntBASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 AC087045.2-201ENST00000606279 1003 ntBASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 RN7SL725P-201ENST00000606439 259 ntBASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 AC092171.5-201ENST00000608012 942 ntBASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.21■□□□□ 0.18
CNKSR3Q6P9H4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
CNKSR3Q6P9H4 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.21■□□□□ 0.18
CNKSR3Q6P9H4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.21■□□□□ 0.18
CNKSR3Q6P9H4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CNKSR3Q6P9H4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.18
CNKSR3Q6P9H4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 CICP11-201ENST00000434745 2827 ntBASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 AC006449.5-201ENST00000610658 2098 ntBASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNKSR3Q6P9H4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 FAM90A2P-201ENST00000511144 1395 ntBASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 FAM90A25P-201ENST00000528404 1395 ntBASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNKSR3Q6P9H4 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms