Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 AC097376.2-205ENST00000610159 5334 ntBASIC18.28■□□□□ 0.52
RNF20Q5VTR2 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 AC093525.8-201ENST00000624099 1342 ntBASIC18.28■□□□□ 0.52
RNF20Q5VTR2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 AL645937.2-201ENST00000396808 931 ntBASIC18.28■□□□□ 0.52
RNF20Q5VTR2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 AL353779.1-201ENST00000434793 351 ntBASIC18.28■□□□□ 0.52
RNF20Q5VTR2 SPTLC1P1-201ENST00000447199 261 ntBASIC18.28■□□□□ 0.52
RNF20Q5VTR2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 UGT1A2P-201ENST00000454886 866 ntBASIC18.28■□□□□ 0.52
RNF20Q5VTR2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 BRI3BPP1-201ENST00000594224 787 ntBASIC18.28■□□□□ 0.52
RNF20Q5VTR2 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.27■□□□□ 0.52
RNF20Q5VTR2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 AL360270.3-201ENST00000609118 1348 ntBASIC18.27■□□□□ 0.52
RNF20Q5VTR2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 DFFBP1-201ENST00000433250 979 ntBASIC18.27■□□□□ 0.52
RNF20Q5VTR2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RNF20Q5VTR2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF20Q5VTR2 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF20Q5VTR2 AL391825.1-201ENST00000457671 1364 ntBASIC18.27■□□□□ 0.51
RNF20Q5VTR2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RNF20Q5VTR2 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.27■□□□□ 0.51
RNF20Q5VTR2 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF20Q5VTR2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF20Q5VTR2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 219.2 ms