Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
RC3H1Q5TC82 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
RC3H1Q5TC82 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RC3H1Q5TC82 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RC3H1Q5TC82 CICP13-201ENST00000422015 2789 ntBASIC18.89■□□□□ 0.62
RC3H1Q5TC82 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.89■□□□□ 0.61
RC3H1Q5TC82 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RC3H1Q5TC82 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RC3H1Q5TC82 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RC3H1Q5TC82 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RC3H1Q5TC82 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RC3H1Q5TC82 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RC3H1Q5TC82 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RC3H1Q5TC82 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC18.89■□□□□ 0.61
RC3H1Q5TC82 XBP1P1-201ENST00000436573 652 ntBASIC18.89■□□□□ 0.61
RC3H1Q5TC82 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC18.89■□□□□ 0.61
RC3H1Q5TC82 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC18.89■□□□□ 0.61
RC3H1Q5TC82 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.89■□□□□ 0.61
RC3H1Q5TC82 RPL17P45-201ENST00000586289 509 ntBASIC18.89■□□□□ 0.61
RC3H1Q5TC82 AC133540.1-201ENST00000620845 1019 ntBASIC18.89■□□□□ 0.61
RC3H1Q5TC82 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RC3H1Q5TC82 AC010491.1-201ENST00000563101 2797 ntBASIC18.89■□□□□ 0.61
RC3H1Q5TC82 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RC3H1Q5TC82 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
RC3H1Q5TC82 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC18.89■□□□□ 0.61
RC3H1Q5TC82 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RC3H1Q5TC82 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RC3H1Q5TC82 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RC3H1Q5TC82 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RC3H1Q5TC82 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 MIR557-201ENST00000385239 98 ntBASIC18.88■□□□□ 0.61
RC3H1Q5TC82 AL512430.1-201ENST00000392575 860 ntBASIC18.88■□□□□ 0.61
RC3H1Q5TC82 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 NDUFS6P1-201ENST00000485187 316 ntBASIC18.88■□□□□ 0.61
RC3H1Q5TC82 GCOM2-201ENST00000509133 1104 ntBASIC18.88■□□□□ 0.61
RC3H1Q5TC82 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 SIGLEC18P-201ENST00000602271 909 ntBASIC18.88■□□□□ 0.61
RC3H1Q5TC82 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 LILRP1-201ENST00000444199 1370 ntBASIC18.88■□□□□ 0.61
RC3H1Q5TC82 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 LINC01165-201ENST00000445190 1623 ntBASIC18.88■□□□□ 0.61
RC3H1Q5TC82 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RC3H1Q5TC82 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 AP000358.1-201ENST00000456260 156 ntBASIC18.87■□□□□ 0.61
RC3H1Q5TC82 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 IGHV3-37-201ENST00000518544 340 ntBASIC18.87■□□□□ 0.61
RC3H1Q5TC82 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 AC007881.3-201ENST00000608897 607 ntBASIC18.87■□□□□ 0.61
RC3H1Q5TC82 MIR6756-201ENST00000616240 63 ntBASIC18.87■□□□□ 0.61
RC3H1Q5TC82 AC009084.3-201ENST00000623356 437 ntBASIC18.87■□□□□ 0.61
RC3H1Q5TC82 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RC3H1Q5TC82 ZBED1P1-201ENST00000502364 1930 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms