Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SHROOM1Q2M3G4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.66■□□□□ 0.42
SHROOM1Q2M3G4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHROOM1Q2M3G4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SHROOM1Q2M3G4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHROOM1Q2M3G4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.66■□□□□ 0.42
SHROOM1Q2M3G4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.66■□□□□ 0.42
SHROOM1Q2M3G4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.66■□□□□ 0.42
SHROOM1Q2M3G4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 AC087481.3-201ENST00000602886 1894 ntBASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 AC104073.2-201ENST00000453737 312 ntBASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHROOM1Q2M3G4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SHROOM1Q2M3G4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SHROOM1Q2M3G4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 KLF2P1-201ENST00000447438 1042 ntBASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 IMP3P2-201ENST00000489760 475 ntBASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 AC009955.4-201ENST00000597192 544 ntBASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 AL645939.5-201ENST00000606834 243 ntBASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 AL136301.1-201ENST00000615830 422 ntBASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 AL162426.1-201ENST00000624141 743 ntBASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 AL603764.1-201ENST00000636452 321 ntBASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHROOM1Q2M3G4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms