Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SKP1P63208 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.55□□□□□ -0.08
SKP1P63208 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.55□□□□□ -0.08
SKP1P63208 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.55□□□□□ -0.08
SKP1P63208 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.55□□□□□ -0.08
SKP1P63208 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SKP1P63208 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SKP1P63208 AL355864.2-201ENST00000447420 863 ntBASIC14.55□□□□□ -0.08
SKP1P63208 GAPDHP21-201ENST00000450301 1010 ntBASIC14.55□□□□□ -0.08
SKP1P63208 INE1-201ENST00000456273 945 ntBASIC14.55□□□□□ -0.08
SKP1P63208 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SKP1P63208 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SKP1P63208 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.55□□□□□ -0.08
SKP1P63208 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.55□□□□□ -0.08
SKP1P63208 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.55□□□□□ -0.08
SKP1P63208 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.55□□□□□ -0.08
SKP1P63208 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.55□□□□□ -0.08
SKP1P63208 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SKP1P63208 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SKP1P63208 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.55□□□□□ -0.08
SKP1P63208 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.55□□□□□ -0.08
SKP1P63208 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SKP1P63208 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SKP1P63208 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.54□□□□□ -0.08
SKP1P63208 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.54□□□□□ -0.08
SKP1P63208 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.54□□□□□ -0.08
SKP1P63208 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.54□□□□□ -0.08
SKP1P63208 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
SKP1P63208 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SKP1P63208 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.54□□□□□ -0.08
SKP1P63208 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.54□□□□□ -0.08
SKP1P63208 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 KRT43P-201ENST00000434019 910 ntBASIC14.54□□□□□ -0.08
SKP1P63208 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.54□□□□□ -0.08
SKP1P63208 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.54□□□□□ -0.08
SKP1P63208 RN7SL837P-201ENST00000463010 287 ntBASIC14.54□□□□□ -0.08
SKP1P63208 TDH-203ENST00000531764 1110 ntBASIC14.54□□□□□ -0.08
SKP1P63208 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.54□□□□□ -0.08
SKP1P63208 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.54□□□□□ -0.08
SKP1P63208 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
SKP1P63208 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.54□□□□□ -0.08
SKP1P63208 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.54□□□□□ -0.08
SKP1P63208 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SKP1P63208 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
SKP1P63208 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.53□□□□□ -0.08
SKP1P63208 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SKP1P63208 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
SKP1P63208 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
SKP1P63208 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SKP1P63208 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SKP1P63208 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
SKP1P63208 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SKP1P63208 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms