Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.38□□□□□ -0.27
FOXG1P55316 AC025279.2-201ENST00000569730 653 ntBASIC13.38□□□□□ -0.27
FOXG1P55316 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.38□□□□□ -0.27
FOXG1P55316 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.38□□□□□ -0.27
FOXG1P55316 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.38□□□□□ -0.27
FOXG1P55316 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.38□□□□□ -0.27
FOXG1P55316 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.38□□□□□ -0.27
FOXG1P55316 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.38□□□□□ -0.27
FOXG1P55316 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.38□□□□□ -0.27
FOXG1P55316 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.38□□□□□ -0.27
FOXG1P55316 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
FOXG1P55316 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.38□□□□□ -0.27
FOXG1P55316 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.38□□□□□ -0.27
FOXG1P55316 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
FOXG1P55316 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 LRRC59-203ENST00000576448 1531 ntBASIC13.38□□□□□ -0.27
FOXG1P55316 AC023157.3-201ENST00000619086 2088 ntBASIC13.38□□□□□ -0.27
FOXG1P55316 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
FOXG1P55316 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
FOXG1P55316 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.37□□□□□ -0.27
FOXG1P55316 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
FOXG1P55316 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
FOXG1P55316 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.37□□□□□ -0.27
FOXG1P55316 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
FOXG1P55316 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.37□□□□□ -0.27
FOXG1P55316 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
FOXG1P55316 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
FOXG1P55316 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 MIR658-201ENST00000385210 100 ntBASIC13.37□□□□□ -0.27
FOXG1P55316 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
FOXG1P55316 FAM197Y7-201ENST00000432892 766 ntBASIC13.37□□□□□ -0.27
FOXG1P55316 KRT43P-201ENST00000434019 910 ntBASIC13.37□□□□□ -0.27
FOXG1P55316 AC016694.1-201ENST00000434179 700 ntBASIC13.37□□□□□ -0.27
FOXG1P55316 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
FOXG1P55316 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.37□□□□□ -0.27
FOXG1P55316 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.37□□□□□ -0.27
FOXG1P55316 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.37□□□□□ -0.27
FOXG1P55316 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
FOXG1P55316 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.37□□□□□ -0.27
FOXG1P55316 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.37□□□□□ -0.27
FOXG1P55316 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.37□□□□□ -0.27
FOXG1P55316 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
FOXG1P55316 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.37□□□□□ -0.27
FOXG1P55316 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.37□□□□□ -0.27
FOXG1P55316 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.37□□□□□ -0.27
FOXG1P55316 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
FOXG1P55316 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
FOXG1P55316 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.37□□□□□ -0.27
FOXG1P55316 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FOXG1P55316 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.37□□□□□ -0.27
FOXG1P55316 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
FOXG1P55316 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
FOXG1P55316 AGAP7P-201ENST00000582299 2062 ntBASIC13.36□□□□□ -0.27
FOXG1P55316 AGAP14-201ENST00000624701 2060 ntBASIC13.36□□□□□ -0.27
FOXG1P55316 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
FOXG1P55316 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
FOXG1P55316 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.36□□□□□ -0.27
FOXG1P55316 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 AC055811.4-201ENST00000624039 1754 ntBASIC13.36□□□□□ -0.27
FOXG1P55316 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms