Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDH8P55286 AC005229.1-201ENST00000392885 409 ntBASIC16.29■□□□□ 0.2
CDH8P55286 AC092933.1-201ENST00000393644 945 ntBASIC16.29■□□□□ 0.2
CDH8P55286 AC079776.1-201ENST00000401540 1152 ntBASIC16.29■□□□□ 0.2
CDH8P55286 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH8P55286 KRT18P25-201ENST00000508931 1278 ntBASIC16.29■□□□□ 0.2
CDH8P55286 KRT17P8-201ENST00000540749 863 ntBASIC16.29■□□□□ 0.2
CDH8P55286 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH8P55286 GNRHR2-203ENST00000581100 1187 ntBASIC16.29■□□□□ 0.2
CDH8P55286 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH8P55286 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH8P55286 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH8P55286 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH8P55286 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH8P55286 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH8P55286 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.29■□□□□ 0.2
CDH8P55286 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH8P55286 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH8P55286 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH8P55286 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH8P55286 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH8P55286 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH8P55286 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH8P55286 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH8P55286 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH8P55286 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDH8P55286 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH8P55286 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH8P55286 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH8P55286 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH8P55286 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH8P55286 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH8P55286 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH8P55286 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDH8P55286 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH8P55286 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH8P55286 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH8P55286 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDH8P55286 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH8P55286 ACTBP8-201ENST00000403258 1108 ntBASIC16.28■□□□□ 0.2
CDH8P55286 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.28■□□□□ 0.2
CDH8P55286 EIF3FP3-201ENST00000434851 1086 ntBASIC16.28■□□□□ 0.2
CDH8P55286 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.28■□□□□ 0.2
CDH8P55286 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH8P55286 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.28■□□□□ 0.2
CDH8P55286 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH8P55286 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.28■□□□□ 0.2
CDH8P55286 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH8P55286 AL162274.1-201ENST00000617191 1098 ntBASIC16.28■□□□□ 0.2
CDH8P55286 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CDH8P55286 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH8P55286 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH8P55286 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH8P55286 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH8P55286 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CDH8P55286 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH8P55286 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.28■□□□□ 0.2
CDH8P55286 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH8P55286 AC068587.6-202ENST00000641839 5619 ntBASIC16.28■□□□□ 0.2
CDH8P55286 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH8P55286 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH8P55286 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH8P55286 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH8P55286 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH8P55286 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
CDH8P55286 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH8P55286 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH8P55286 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDH8P55286 ZBED1P1-201ENST00000502364 1930 ntBASIC16.27■□□□□ 0.2
CDH8P55286 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH8P55286 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDH8P55286 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH8P55286 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH8P55286 NORAD-201ENST00000565493 5339 ntBASIC16.27■□□□□ 0.2
CDH8P55286 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.27■□□□□ 0.2
CDH8P55286 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDH8P55286 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH8P55286 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH8P55286 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDH8P55286 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH8P55286 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.27■□□□□ 0.2
CDH8P55286 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.27■□□□□ 0.2
CDH8P55286 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDH8P55286 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CDH8P55286 AL355864.2-201ENST00000447420 863 ntBASIC16.27■□□□□ 0.2
CDH8P55286 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.27■□□□□ 0.2
CDH8P55286 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CDH8P55286 FTH1P14-201ENST00000482930 551 ntBASIC16.27■□□□□ 0.2
CDH8P55286 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH8P55286 HILS1-202ENST00000545329 423 ntBASIC16.27■□□□□ 0.2
CDH8P55286 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.27■□□□□ 0.2
CDH8P55286 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDH8P55286 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.27■□□□□ 0.2
CDH8P55286 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.27■□□□□ 0.2
CDH8P55286 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH8P55286 AL022328.1-201ENST00000610050 478 ntBASIC16.27■□□□□ 0.2
CDH8P55286 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH8P55286 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH8P55286 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH8P55286 LRRC59-203ENST00000576448 1531 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms