Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.62□□□□□ -0.07
NR1H2P55055 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.62□□□□□ -0.07
NR1H2P55055 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.62□□□□□ -0.07
NR1H2P55055 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.62□□□□□ -0.07
NR1H2P55055 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.62□□□□□ -0.07
NR1H2P55055 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.62□□□□□ -0.07
NR1H2P55055 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.62□□□□□ -0.07
NR1H2P55055 AC099522.2-201ENST00000607001 744 ntBASIC14.62□□□□□ -0.07
NR1H2P55055 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.62□□□□□ -0.07
NR1H2P55055 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NR1H2P55055 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.62□□□□□ -0.07
NR1H2P55055 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
NR1H2P55055 AC009093.7-201ENST00000623853 1223 ntBASIC14.62□□□□□ -0.07
NR1H2P55055 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.62□□□□□ -0.07
NR1H2P55055 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H2P55055 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H2P55055 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.62□□□□□ -0.07
NR1H2P55055 PPT1-213ENST00000641319 2388 ntBASIC14.62□□□□□ -0.07
NR1H2P55055 AC011474.4-201ENST00000623523 2076 ntBASIC14.62□□□□□ -0.07
NR1H2P55055 AC138969.2-201ENST00000532739 9932 ntBASIC14.62□□□□□ -0.07
NR1H2P55055 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H2P55055 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H2P55055 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H2P55055 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H2P55055 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NR1H2P55055 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.62□□□□□ -0.07
NR1H2P55055 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
NR1H2P55055 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H2P55055 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H2P55055 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
NR1H2P55055 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NR1H2P55055 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.61□□□□□ -0.07
NR1H2P55055 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H2P55055 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.61□□□□□ -0.07
NR1H2P55055 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H2P55055 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H2P55055 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H2P55055 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H2P55055 WASH6P-202ENST00000359512 1437 ntBASIC14.61□□□□□ -0.07
NR1H2P55055 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.61□□□□□ -0.07
NR1H2P55055 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H2P55055 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
NR1H2P55055 TFAMP1-201ENST00000412727 736 ntBASIC14.61□□□□□ -0.07
NR1H2P55055 AL627223.1-201ENST00000416693 442 ntBASIC14.61□□□□□ -0.07
NR1H2P55055 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.61□□□□□ -0.07
NR1H2P55055 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
NR1H2P55055 AC109635.5-201ENST00000533593 962 ntBASIC14.61□□□□□ -0.07
NR1H2P55055 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H2P55055 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.61□□□□□ -0.07
NR1H2P55055 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H2P55055 LINC00628-201ENST00000628516 1289 ntBASIC14.61□□□□□ -0.07
NR1H2P55055 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
NR1H2P55055 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H2P55055 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.61□□□□□ -0.07
NR1H2P55055 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H2P55055 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H2P55055 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H2P55055 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H2P55055 AC097359.2-201ENST00000604992 2389 ntBASIC14.61□□□□□ -0.07
NR1H2P55055 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H2P55055 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.61□□□□□ -0.07
NR1H2P55055 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NR1H2P55055 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
NR1H2P55055 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H2P55055 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NR1H2P55055 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.6□□□□□ -0.07
NR1H2P55055 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.6□□□□□ -0.07
NR1H2P55055 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.6□□□□□ -0.07
NR1H2P55055 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
NR1H2P55055 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NR1H2P55055 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.6□□□□□ -0.07
NR1H2P55055 HMGA1P7-201ENST00000406908 502 ntBASIC14.6□□□□□ -0.07
NR1H2P55055 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.6□□□□□ -0.07
NR1H2P55055 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.6□□□□□ -0.07
NR1H2P55055 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 AL592309.1-201ENST00000443127 649 ntBASIC14.6□□□□□ -0.07
NR1H2P55055 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
NR1H2P55055 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.6□□□□□ -0.07
NR1H2P55055 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.6□□□□□ -0.07
NR1H2P55055 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.6□□□□□ -0.07
NR1H2P55055 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.6□□□□□ -0.07
NR1H2P55055 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.6□□□□□ -0.07
NR1H2P55055 AC093512.1-201ENST00000617969 520 ntBASIC14.6□□□□□ -0.07
NR1H2P55055 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.6□□□□□ -0.07
NR1H2P55055 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms