Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCS2P54868 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.47■□□□□ 0.39
HMGCS2P54868 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HMGCS2P54868 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCS2P54868 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCS2P54868 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCS2P54868 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCS2P54868 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCS2P54868 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HMGCS2P54868 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCS2P54868 AC090616.6-203ENST00000579186 1945 ntBASIC17.47■□□□□ 0.39
HMGCS2P54868 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCS2P54868 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCS2P54868 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCS2P54868 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCS2P54868 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.46■□□□□ 0.39
HMGCS2P54868 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCS2P54868 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HMGCS2P54868 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HMGCS2P54868 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.46■□□□□ 0.39
HMGCS2P54868 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HMGCS2P54868 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.46■□□□□ 0.39
HMGCS2P54868 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.46■□□□□ 0.39
HMGCS2P54868 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCS2P54868 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.46■□□□□ 0.39
HMGCS2P54868 EEF1DP6-201ENST00000449232 372 ntBASIC17.46■□□□□ 0.39
HMGCS2P54868 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
HMGCS2P54868 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.46■□□□□ 0.39
HMGCS2P54868 RPL18P13-201ENST00000478088 569 ntBASIC17.46■□□□□ 0.39
HMGCS2P54868 AC125604.1-201ENST00000496255 707 ntBASIC17.46■□□□□ 0.39
HMGCS2P54868 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.46■□□□□ 0.39
HMGCS2P54868 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.46■□□□□ 0.39
HMGCS2P54868 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.46■□□□□ 0.39
HMGCS2P54868 DUX4L46-201ENST00000566845 751 ntBASIC17.46■□□□□ 0.39
HMGCS2P54868 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.46■□□□□ 0.39
HMGCS2P54868 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.46■□□□□ 0.39
HMGCS2P54868 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
HMGCS2P54868 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.46■□□□□ 0.39
HMGCS2P54868 AC128714.1-201ENST00000637035 887 ntBASIC17.46■□□□□ 0.39
HMGCS2P54868 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HMGCS2P54868 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
HMGCS2P54868 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCS2P54868 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.46■□□□□ 0.39
HMGCS2P54868 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCS2P54868 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HMGCS2P54868 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
HMGCS2P54868 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCS2P54868 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.46■□□□□ 0.39
HMGCS2P54868 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.46■□□□□ 0.39
HMGCS2P54868 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCS2P54868 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCS2P54868 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCS2P54868 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.46■□□□□ 0.39
HMGCS2P54868 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HMGCS2P54868 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HMGCS2P54868 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS2P54868 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS2P54868 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HMGCS2P54868 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.45■□□□□ 0.38
HMGCS2P54868 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.45■□□□□ 0.38
HMGCS2P54868 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.45■□□□□ 0.38
HMGCS2P54868 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS2P54868 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.45■□□□□ 0.38
HMGCS2P54868 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS2P54868 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS2P54868 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS2P54868 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
HMGCS2P54868 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS2P54868 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.45■□□□□ 0.38
HMGCS2P54868 AC010141.1-201ENST00000411585 623 ntBASIC17.45■□□□□ 0.38
HMGCS2P54868 MAGEA5-201ENST00000446757 942 ntBASIC17.45■□□□□ 0.38
HMGCS2P54868 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.45■□□□□ 0.38
HMGCS2P54868 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS2P54868 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.45■□□□□ 0.38
HMGCS2P54868 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.45■□□□□ 0.38
HMGCS2P54868 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.45■□□□□ 0.38
HMGCS2P54868 SPCS2P2-201ENST00000603270 608 ntBASIC17.45■□□□□ 0.38
HMGCS2P54868 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS2P54868 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.45■□□□□ 0.38
HMGCS2P54868 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.45■□□□□ 0.38
HMGCS2P54868 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS2P54868 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS2P54868 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS2P54868 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS2P54868 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS2P54868 AL157791.1-201ENST00000553667 1699 ntBASIC17.45■□□□□ 0.38
HMGCS2P54868 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.45■□□□□ 0.38
HMGCS2P54868 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS2P54868 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS2P54868 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS2P54868 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HMGCS2P54868 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS2P54868 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HMGCS2P54868 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS2P54868 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.44■□□□□ 0.38
HMGCS2P54868 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS2P54868 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS2P54868 RN7SKP230-201ENST00000365642 335 ntBASIC17.44■□□□□ 0.38
HMGCS2P54868 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS2P54868 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms