Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.09■□□□□ 0.01
EMP3P54852 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.09■□□□□ 0.01
EMP3P54852 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.09■□□□□ 0.01
EMP3P54852 AL390755.1-201ENST00000623716 2027 ntBASIC15.09■□□□□ 0.01
EMP3P54852 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
EMP3P54852 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
EMP3P54852 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.09■□□□□ 0.01
EMP3P54852 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.09■□□□□ 0.01
EMP3P54852 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.09■□□□□ 0.01
EMP3P54852 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
EMP3P54852 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC15.09■□□□□ 0.01
EMP3P54852 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.09■□□□□ 0.01
EMP3P54852 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.09■□□□□ 0.01
EMP3P54852 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 AC004918.1-201ENST00000467537 770 ntTSL 2 BASIC15.09■□□□□ 0.01
EMP3P54852 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.09■□□□□ 0.01
EMP3P54852 TYW3-205ENST00000479111 1130 ntTSL 3 BASIC15.09■□□□□ 0.01
EMP3P54852 AC093004.1-201ENST00000508850 424 ntBASIC15.09■□□□□ 0.01
EMP3P54852 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC15.09■□□□□ 0.01
EMP3P54852 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.09■□□□□ 0.01
EMP3P54852 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.09■□□□□ 0.01
EMP3P54852 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
EMP3P54852 AC011458.1-201ENST00000604034 617 ntBASIC15.09■□□□□ 0.01
EMP3P54852 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.09■□□□□ 0.01
EMP3P54852 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.09■□□□□ 0.01
EMP3P54852 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.09■□□□□ 0.01
EMP3P54852 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
EMP3P54852 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.09■□□□□ 0.01
EMP3P54852 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.09■□□□□ 0.01
EMP3P54852 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.09■□□□□ 0.01
EMP3P54852 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.09■□□□□ 0.01
EMP3P54852 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
EMP3P54852 PRAL-201ENST00000624952 3286 ntBASIC15.09■□□□□ 0.01
EMP3P54852 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EMP3P54852 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.08■□□□□ 0.01
EMP3P54852 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
EMP3P54852 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
EMP3P54852 FCAR-203ENST00000355524 1483 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
EMP3P54852 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
EMP3P54852 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
EMP3P54852 AC112504.1-201ENST00000623415 1841 ntBASIC15.08■□□□□ 0.01
EMP3P54852 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
EMP3P54852 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
EMP3P54852 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.08■□□□□ 0
EMP3P54852 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
EMP3P54852 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
EMP3P54852 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.08■□□□□ 0
EMP3P54852 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
EMP3P54852 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.08■□□□□ 0
EMP3P54852 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
EMP3P54852 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
EMP3P54852 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
EMP3P54852 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.08■□□□□ 0
EMP3P54852 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.08■□□□□ 0
EMP3P54852 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC15.08■□□□□ 0
EMP3P54852 MTND2P12-201ENST00000417560 1252 ntBASIC15.08■□□□□ 0
EMP3P54852 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC15.08■□□□□ 0
EMP3P54852 DFFBP1-201ENST00000433250 979 ntBASIC15.08■□□□□ 0
EMP3P54852 RPL13P2-201ENST00000440687 659 ntBASIC15.08■□□□□ 0
EMP3P54852 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.08■□□□□ 0
EMP3P54852 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC15.08■□□□□ 0
EMP3P54852 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC15.08■□□□□ 0
EMP3P54852 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC15.08■□□□□ 0
EMP3P54852 TIMM17BP1-201ENST00000545713 516 ntBASIC15.08■□□□□ 0
EMP3P54852 HERC2P4-202ENST00000564145 683 ntTSL 3 BASIC15.08■□□□□ 0
EMP3P54852 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.08■□□□□ 0
EMP3P54852 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.08■□□□□ 0
EMP3P54852 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.08■□□□□ 0
EMP3P54852 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.08■□□□□ 0
EMP3P54852 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.08■□□□□ 0
EMP3P54852 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.08■□□□□ 0
EMP3P54852 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.08■□□□□ 0
EMP3P54852 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.08■□□□□ 0
EMP3P54852 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
EMP3P54852 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.08■□□□□ 0
EMP3P54852 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
EMP3P54852 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
EMP3P54852 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms