Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HMGA2P52926 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGA2P52926 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGA2P52926 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HMGA2P52926 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HMGA2P52926 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGA2P52926 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HMGA2P52926 SDHAP3-202ENST00000515467 728 ntBASIC13.94□□□□□ -0.18
HMGA2P52926 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.94□□□□□ -0.18
HMGA2P52926 AL512361.1-201ENST00000554200 418 ntBASIC13.94□□□□□ -0.18
HMGA2P52926 MIR4469-201ENST00000583919 79 ntBASIC13.94□□□□□ -0.18
HMGA2P52926 AC010327.5-201ENST00000586923 3061 ntBASIC13.94□□□□□ -0.18
HMGA2P52926 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.94□□□□□ -0.18
HMGA2P52926 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.94□□□□□ -0.18
HMGA2P52926 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.94□□□□□ -0.18
HMGA2P52926 MIR6080-201ENST00000617359 66 ntBASIC13.94□□□□□ -0.18
HMGA2P52926 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.94□□□□□ -0.18
HMGA2P52926 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.94□□□□□ -0.18
HMGA2P52926 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HMGA2P52926 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGA2P52926 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.94□□□□□ -0.18
HMGA2P52926 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGA2P52926 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.94□□□□□ -0.18
HMGA2P52926 AC023090.2-201ENST00000625182 2110 ntBASIC13.94□□□□□ -0.18
HMGA2P52926 AL157414.3-201ENST00000624276 1954 ntBASIC13.94□□□□□ -0.18
HMGA2P52926 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.94□□□□□ -0.18
HMGA2P52926 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.94□□□□□ -0.18
HMGA2P52926 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGA2P52926 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HMGA2P52926 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGA2P52926 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HMGA2P52926 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HMGA2P52926 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGA2P52926 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.94□□□□□ -0.18
HMGA2P52926 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.94□□□□□ -0.18
HMGA2P52926 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.94□□□□□ -0.18
HMGA2P52926 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HMGA2P52926 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HMGA2P52926 MYO15B-237ENST00000642007 4893 ntBASIC13.93□□□□□ -0.18
HMGA2P52926 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HMGA2P52926 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.93□□□□□ -0.18
HMGA2P52926 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HMGA2P52926 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.93□□□□□ -0.18
HMGA2P52926 TUBB3P1-201ENST00000405796 1332 ntBASIC13.93□□□□□ -0.18
HMGA2P52926 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HMGA2P52926 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 MST1P2-201ENST00000457982 2291 ntBASIC13.93□□□□□ -0.18
HMGA2P52926 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.93□□□□□ -0.18
HMGA2P52926 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
HMGA2P52926 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.93□□□□□ -0.18
HMGA2P52926 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
HMGA2P52926 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.93□□□□□ -0.18
HMGA2P52926 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.93□□□□□ -0.18
HMGA2P52926 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.93□□□□□ -0.18
HMGA2P52926 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 AC022447.6-201ENST00000515522 438 ntBASIC13.93□□□□□ -0.18
HMGA2P52926 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.93□□□□□ -0.18
HMGA2P52926 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.93□□□□□ -0.18
HMGA2P52926 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.93□□□□□ -0.18
HMGA2P52926 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.93□□□□□ -0.18
HMGA2P52926 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.93□□□□□ -0.18
HMGA2P52926 AC010336.2-201ENST00000564226 506 ntBASIC13.93□□□□□ -0.18
HMGA2P52926 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.93□□□□□ -0.18
HMGA2P52926 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.93□□□□□ -0.18
HMGA2P52926 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HMGA2P52926 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.93□□□□□ -0.18
HMGA2P52926 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HMGA2P52926 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HMGA2P52926 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
HMGA2P52926 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGA2P52926 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMGA2P52926 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMGA2P52926 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMGA2P52926 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMGA2P52926 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMGA2P52926 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMGA2P52926 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HMGA2P52926 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HMGA2P52926 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMGA2P52926 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.92□□□□□ -0.18
HMGA2P52926 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms