Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.17■□□□□ 0.02
ZNF140P52738 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ZNF140P52738 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.16■□□□□ 0.02
ZNF140P52738 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF140P52738 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF140P52738 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ZNF140P52738 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF140P52738 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF140P52738 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF140P52738 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ZNF140P52738 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF140P52738 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.16■□□□□ 0.02
ZNF140P52738 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
ZNF140P52738 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF140P52738 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
ZNF140P52738 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
ZNF140P52738 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.16■□□□□ 0.02
ZNF140P52738 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
ZNF140P52738 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.16■□□□□ 0.02
ZNF140P52738 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.16■□□□□ 0.02
ZNF140P52738 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF140P52738 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.16■□□□□ 0.02
ZNF140P52738 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.16■□□□□ 0.02
ZNF140P52738 AC027307.3-201ENST00000594262 1100 ntBASIC15.16■□□□□ 0.02
ZNF140P52738 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
ZNF140P52738 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ZNF140P52738 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF140P52738 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ZNF140P52738 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF140P52738 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF140P52738 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 KRT8P35-201ENST00000483942 1338 ntBASIC15.16■□□□□ 0.02
ZNF140P52738 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.16■□□□□ 0.02
ZNF140P52738 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.16■□□□□ 0.02
ZNF140P52738 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF140P52738 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
ZNF140P52738 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF140P52738 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF140P52738 AC106881.1-201ENST00000605849 3329 ntBASIC15.15■□□□□ 0.02
ZNF140P52738 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF140P52738 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF140P52738 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF140P52738 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF140P52738 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
ZNF140P52738 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF140P52738 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ZNF140P52738 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF140P52738 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF140P52738 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ZNF140P52738 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
ZNF140P52738 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF140P52738 ACTG1P3-201ENST00000431775 1114 ntBASIC15.15■□□□□ 0.02
ZNF140P52738 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF140P52738 RN7SL692P-201ENST00000464677 288 ntBASIC15.15■□□□□ 0.02
ZNF140P52738 GIMAP3P-201ENST00000495150 836 ntBASIC15.15■□□□□ 0.02
ZNF140P52738 AC026434.2-201ENST00000506094 1078 ntBASIC15.15■□□□□ 0.02
ZNF140P52738 KRT18P25-201ENST00000508931 1278 ntBASIC15.15■□□□□ 0.02
ZNF140P52738 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF140P52738 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF140P52738 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF140P52738 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms