Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC26.29■■□□□ 1.8
SMARCA2P51531 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC26.29■■□□□ 1.8
SMARCA2P51531 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC26.29■■□□□ 1.8
SMARCA2P51531 AC140113.1-201ENST00000603467 169 ntBASIC26.29■■□□□ 1.8
SMARCA2P51531 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC26.29■■□□□ 1.8
SMARCA2P51531 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCA2P51531 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCA2P51531 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCA2P51531 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCA2P51531 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCA2P51531 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCA2P51531 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
SMARCA2P51531 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCA2P51531 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC26.29■■□□□ 1.8
SMARCA2P51531 ERP29P1-201ENST00000442902 706 ntBASIC26.29■■□□□ 1.8
SMARCA2P51531 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCA2P51531 DUX4L50-201ENST00000455245 715 ntBASIC26.29■■□□□ 1.8
SMARCA2P51531 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC26.29■■□□□ 1.8
SMARCA2P51531 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC26.29■■□□□ 1.8
SMARCA2P51531 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC26.29■■□□□ 1.8
SMARCA2P51531 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC26.29■■□□□ 1.8
SMARCA2P51531 DGAT2L7P-201ENST00000602462 744 ntBASIC26.29■■□□□ 1.8
SMARCA2P51531 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC26.29■■□□□ 1.8
SMARCA2P51531 AC011471.3-201ENST00000623576 402 ntBASIC26.29■■□□□ 1.8
SMARCA2P51531 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC26.29■■□□□ 1.8
SMARCA2P51531 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCA2P51531 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCA2P51531 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA2P51531 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA2P51531 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
SMARCA2P51531 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA2P51531 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA2P51531 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC26.28■■□□□ 1.8
SMARCA2P51531 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA2P51531 AR-207ENST00000612010 3896 ntTSL 5 BASIC26.28■■□□□ 1.8
SMARCA2P51531 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA2P51531 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC26.28■■□□□ 1.8
SMARCA2P51531 WT1-209ENST00000530998 2421 ntTSL 2 BASIC26.28■■□□□ 1.8
SMARCA2P51531 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA2P51531 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA2P51531 HNRNPA1P27-201ENST00000412087 955 ntBASIC26.28■■□□□ 1.8
SMARCA2P51531 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC26.28■■□□□ 1.8
SMARCA2P51531 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC26.28■■□□□ 1.8
SMARCA2P51531 AL135901.1-201ENST00000451812 333 ntBASIC26.28■■□□□ 1.8
SMARCA2P51531 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC26.28■■□□□ 1.8
SMARCA2P51531 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SMARCA2P51531 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC26.28■■□□□ 1.8
SMARCA2P51531 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC26.28■■□□□ 1.8
SMARCA2P51531 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC26.28■■□□□ 1.8
SMARCA2P51531 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SMARCA2P51531 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC26.27■■□□□ 1.8
SMARCA2P51531 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCA2P51531 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCA2P51531 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCA2P51531 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCA2P51531 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCA2P51531 PCDH8P1-201ENST00000428983 2773 ntBASIC26.27■■□□□ 1.8
SMARCA2P51531 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCA2P51531 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC26.27■■□□□ 1.8
SMARCA2P51531 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC26.27■■□□□ 1.8
SMARCA2P51531 PGAM1P12-201ENST00000505622 748 ntBASIC26.27■■□□□ 1.8
SMARCA2P51531 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCA2P51531 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCA2P51531 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC26.27■■□□□ 1.8
SMARCA2P51531 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC26.27■■□□□ 1.8
SMARCA2P51531 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
SMARCA2P51531 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCA2P51531 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCA2P51531 AL359258.3-201ENST00000622910 2331 ntBASIC26.27■■□□□ 1.8
SMARCA2P51531 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC26.27■■□□□ 1.8
SMARCA2P51531 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCA2P51531 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC26.27■■□□□ 1.8
SMARCA2P51531 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCA2P51531 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC26.27■■□□□ 1.8
SMARCA2P51531 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
SMARCA2P51531 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCA2P51531 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCA2P51531 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.8
SMARCA2P51531 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCA2P51531 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCA2P51531 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC26.26■■□□□ 1.79
SMARCA2P51531 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC26.26■■□□□ 1.79
SMARCA2P51531 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCA2P51531 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCA2P51531 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCA2P51531 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
SMARCA2P51531 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCA2P51531 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC26.26■■□□□ 1.79
SMARCA2P51531 AQP7P5-201ENST00000428759 1049 ntBASIC26.26■■□□□ 1.79
SMARCA2P51531 AQP7P4-201ENST00000447083 1042 ntBASIC26.26■■□□□ 1.79
SMARCA2P51531 AQP7P2-201ENST00000453967 1041 ntBASIC26.26■■□□□ 1.79
SMARCA2P51531 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCA2P51531 AQP7P3-201ENST00000624547 1041 ntBASIC26.26■■□□□ 1.79
SMARCA2P51531 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCA2P51531 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC26.26■■□□□ 1.79
SMARCA2P51531 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC26.26■■□□□ 1.79
SMARCA2P51531 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
SMARCA2P51531 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC26.26■■□□□ 1.79
SMARCA2P51531 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC26.26■■□□□ 1.79
SMARCA2P51531 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms