Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.8■□□□□ 0.28
CENPFP49454 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CENPFP49454 GCSHP3-201ENST00000431120 391 ntBASIC16.8■□□□□ 0.28
CENPFP49454 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC16.8■□□□□ 0.28
CENPFP49454 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CENPFP49454 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC16.8■□□□□ 0.28
CENPFP49454 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CENPFP49454 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CENPFP49454 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.8■□□□□ 0.28
CENPFP49454 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CENPFP49454 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.8■□□□□ 0.28
CENPFP49454 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CENPFP49454 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CENPFP49454 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CENPFP49454 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CENPFP49454 AC006058.4-201ENST00000624016 1670 ntBASIC16.8■□□□□ 0.28
CENPFP49454 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CENPFP49454 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.79■□□□□ 0.28
CENPFP49454 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.79■□□□□ 0.28
CENPFP49454 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPFP49454 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CENPFP49454 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.79■□□□□ 0.28
CENPFP49454 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC16.79■□□□□ 0.28
CENPFP49454 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC16.79■□□□□ 0.28
CENPFP49454 AL354861.1-201ENST00000445213 355 ntBASIC16.79■□□□□ 0.28
CENPFP49454 AP000358.1-201ENST00000456260 156 ntBASIC16.79■□□□□ 0.28
CENPFP49454 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CENPFP49454 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.79■□□□□ 0.28
CENPFP49454 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.79■□□□□ 0.28
CENPFP49454 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPFP49454 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CENPFP49454 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPFP49454 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CENPFP49454 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPFP49454 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPFP49454 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.79■□□□□ 0.28
CENPFP49454 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPFP49454 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CENPFP49454 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.79■□□□□ 0.28
CENPFP49454 SERBP1P2-201ENST00000436888 1164 ntBASIC16.79■□□□□ 0.28
CENPFP49454 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.79■□□□□ 0.28
CENPFP49454 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
CENPFP49454 AC004686.1-201ENST00000605113 538 ntBASIC16.79■□□□□ 0.28
CENPFP49454 PTPN20CP-201ENST00000614090 920 ntBASIC16.79■□□□□ 0.28
CENPFP49454 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.79■□□□□ 0.28
CENPFP49454 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPFP49454 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPFP49454 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.79■□□□□ 0.28
CENPFP49454 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPFP49454 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CENPFP49454 AC090616.6-203ENST00000579186 1945 ntBASIC16.79■□□□□ 0.28
CENPFP49454 AL513523.2-202ENST00000427283 2040 ntBASIC16.79■□□□□ 0.28
CENPFP49454 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CENPFP49454 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.79■□□□□ 0.28
CENPFP49454 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CENPFP49454 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CENPFP49454 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.79■□□□□ 0.28
CENPFP49454 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.79■□□□□ 0.28
CENPFP49454 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC16.79■□□□□ 0.28
CENPFP49454 AC006548.2-201ENST00000605217 529 ntBASIC16.79■□□□□ 0.28
CENPFP49454 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.79■□□□□ 0.28
CENPFP49454 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.79■□□□□ 0.28
CENPFP49454 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CENPFP49454 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CENPFP49454 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.79■□□□□ 0.28
CENPFP49454 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPFP49454 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CENPFP49454 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.79■□□□□ 0.28
CENPFP49454 AC006504.5-208ENST00000588784 2401 ntBASIC16.79■□□□□ 0.28
CENPFP49454 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.78■□□□□ 0.28
CENPFP49454 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.78■□□□□ 0.28
CENPFP49454 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CENPFP49454 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPFP49454 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPFP49454 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CENPFP49454 AC105250.1-201ENST00000509378 2057 ntBASIC16.78■□□□□ 0.28
CENPFP49454 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPFP49454 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CENPFP49454 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.78■□□□□ 0.28
CENPFP49454 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPFP49454 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CENPFP49454 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPFP49454 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC16.78■□□□□ 0.28
CENPFP49454 PEBP1P2-201ENST00000603980 558 ntBASIC16.78■□□□□ 0.28
CENPFP49454 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CENPFP49454 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CENPFP49454 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPFP49454 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.78■□□□□ 0.28
CENPFP49454 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.78■□□□□ 0.28
CENPFP49454 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPFP49454 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPFP49454 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPFP49454 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CENPFP49454 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CENPFP49454 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPFP49454 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CENPFP49454 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CENPFP49454 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPFP49454 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.78■□□□□ 0.28
CENPFP49454 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms