Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CSNK1A1P48729 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.65□□□□□ -0.22
CSNK1A1P48729 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.65□□□□□ -0.22
CSNK1A1P48729 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.65□□□□□ -0.22
CSNK1A1P48729 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CSNK1A1P48729 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.65□□□□□ -0.22
CSNK1A1P48729 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.65□□□□□ -0.22
CSNK1A1P48729 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.65□□□□□ -0.22
CSNK1A1P48729 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.65□□□□□ -0.22
CSNK1A1P48729 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.65□□□□□ -0.22
CSNK1A1P48729 MIR4745-201ENST00000577608 62 ntBASIC13.65□□□□□ -0.22
CSNK1A1P48729 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CSNK1A1P48729 AC107373.2-201ENST00000607735 490 ntBASIC13.65□□□□□ -0.22
CSNK1A1P48729 AC008761.3-201ENST00000624803 892 ntBASIC13.65□□□□□ -0.22
CSNK1A1P48729 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.65□□□□□ -0.22
CSNK1A1P48729 LINC02228-204ENST00000642115 2962 ntBASIC13.65□□□□□ -0.22
CSNK1A1P48729 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
CSNK1A1P48729 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CSNK1A1P48729 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.65□□□□□ -0.22
CSNK1A1P48729 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CSNK1A1P48729 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CSNK1A1P48729 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CSNK1A1P48729 DRD5P1-201ENST00000456605 1438 ntBASIC13.64□□□□□ -0.23
CSNK1A1P48729 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 ZBED1P1-201ENST00000502364 1930 ntBASIC13.64□□□□□ -0.23
CSNK1A1P48729 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 TNRC18P2-201ENST00000417666 2714 ntBASIC13.64□□□□□ -0.23
CSNK1A1P48729 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 AC104457.1-201ENST00000401024 814 ntBASIC13.64□□□□□ -0.23
CSNK1A1P48729 AC236430.1-201ENST00000402231 743 ntBASIC13.64□□□□□ -0.23
CSNK1A1P48729 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 AC002472.2-201ENST00000442739 958 ntBASIC13.64□□□□□ -0.23
CSNK1A1P48729 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 AC026410.3-201ENST00000514280 936 ntBASIC13.64□□□□□ -0.23
CSNK1A1P48729 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 AC123567.1-201ENST00000548294 1261 ntBASIC13.64□□□□□ -0.23
CSNK1A1P48729 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 RN7SL204P-201ENST00000582831 262 ntBASIC13.64□□□□□ -0.23
CSNK1A1P48729 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms