Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.13□□□□□ -0.31
TNFSF4P23510 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.13□□□□□ -0.31
TNFSF4P23510 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
TNFSF4P23510 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TNFSF4P23510 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
TNFSF4P23510 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TNFSF4P23510 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.13□□□□□ -0.31
TNFSF4P23510 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.13□□□□□ -0.31
TNFSF4P23510 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TNFSF4P23510 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.13□□□□□ -0.31
TNFSF4P23510 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.13□□□□□ -0.31
TNFSF4P23510 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.13□□□□□ -0.31
TNFSF4P23510 AL359711.2-201ENST00000563105 872 ntBASIC13.13□□□□□ -0.31
TNFSF4P23510 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.13□□□□□ -0.31
TNFSF4P23510 AC009486.1-201ENST00000569860 813 ntBASIC13.13□□□□□ -0.31
TNFSF4P23510 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.13□□□□□ -0.31
TNFSF4P23510 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.13□□□□□ -0.31
TNFSF4P23510 AC012645.4-201ENST00000610691 1061 ntBASIC13.13□□□□□ -0.31
TNFSF4P23510 WFDC1-204ENST00000613603 549 ntBASIC13.13□□□□□ -0.31
TNFSF4P23510 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.13□□□□□ -0.31
TNFSF4P23510 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.13□□□□□ -0.31
TNFSF4P23510 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.13□□□□□ -0.31
TNFSF4P23510 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.13□□□□□ -0.31
TNFSF4P23510 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNFSF4P23510 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.12□□□□□ -0.31
TNFSF4P23510 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.12□□□□□ -0.31
TNFSF4P23510 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TNFSF4P23510 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.12□□□□□ -0.31
TNFSF4P23510 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.12□□□□□ -0.31
TNFSF4P23510 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.12□□□□□ -0.31
TNFSF4P23510 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.12□□□□□ -0.31
TNFSF4P23510 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.12□□□□□ -0.31
TNFSF4P23510 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TNFSF4P23510 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.12□□□□□ -0.31
TNFSF4P23510 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.12□□□□□ -0.31
TNFSF4P23510 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.12□□□□□ -0.31
TNFSF4P23510 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.12□□□□□ -0.31
TNFSF4P23510 AP005018.1-201ENST00000525475 301 ntBASIC13.12□□□□□ -0.31
TNFSF4P23510 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.12□□□□□ -0.31
TNFSF4P23510 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.12□□□□□ -0.31
TNFSF4P23510 CR383656.12-201ENST00000549567 513 ntBASIC13.12□□□□□ -0.31
TNFSF4P23510 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.12□□□□□ -0.31
TNFSF4P23510 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.12□□□□□ -0.31
TNFSF4P23510 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
TNFSF4P23510 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.12□□□□□ -0.31
TNFSF4P23510 BX539320.1-201ENST00000623759 877 ntBASIC13.12□□□□□ -0.31
TNFSF4P23510 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.12□□□□□ -0.31
TNFSF4P23510 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TNFSF4P23510 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.12□□□□□ -0.31
TNFSF4P23510 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.12□□□□□ -0.31
TNFSF4P23510 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TNFSF4P23510 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.12□□□□□ -0.31
TNFSF4P23510 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TNFSF4P23510 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms