Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AL049840.4-201ENST00000602422 811 ntBASIC13.14□□□□□ -0.31
CCL1P22362 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.14□□□□□ -0.31
CCL1P22362 PRSS30P-206ENST00000641773 873 ntBASIC13.14□□□□□ -0.31
CCL1P22362 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL1P22362 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL1P22362 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.14□□□□□ -0.31
CCL1P22362 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL1P22362 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL1P22362 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL1P22362 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL1P22362 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL1P22362 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL1P22362 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL1P22362 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.14□□□□□ -0.31
CCL1P22362 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL1P22362 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CCL1P22362 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL1P22362 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CCL1P22362 AL137783.1-201ENST00000623494 1896 ntBASIC13.14□□□□□ -0.31
CCL1P22362 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL1P22362 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL1P22362 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.14□□□□□ -0.31
CCL1P22362 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL1P22362 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL1P22362 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCL1P22362 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
CCL1P22362 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL1P22362 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CCL1P22362 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.13□□□□□ -0.31
CCL1P22362 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL1P22362 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
CCL1P22362 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CCL1P22362 NUS1P3-201ENST00000423502 862 ntBASIC13.13□□□□□ -0.31
CCL1P22362 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.13□□□□□ -0.31
CCL1P22362 AC055876.3-201ENST00000431496 288 ntBASIC13.13□□□□□ -0.31
CCL1P22362 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CCL1P22362 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.13□□□□□ -0.31
CCL1P22362 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.13□□□□□ -0.31
CCL1P22362 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.13□□□□□ -0.31
CCL1P22362 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL1P22362 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.13□□□□□ -0.31
CCL1P22362 AC093813.1-201ENST00000605066 256 ntBASIC13.13□□□□□ -0.31
CCL1P22362 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL1P22362 AC138649.4-201ENST00000612222 287 ntBASIC13.13□□□□□ -0.31
CCL1P22362 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL1P22362 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CCL1P22362 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL1P22362 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CCL1P22362 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL1P22362 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL1P22362 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL1P22362 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL1P22362 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL1P22362 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL1P22362 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL1P22362 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL1P22362 AC055811.4-201ENST00000624039 1754 ntBASIC13.12□□□□□ -0.31
CCL1P22362 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CCL1P22362 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CCL1P22362 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CCL1P22362 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.12□□□□□ -0.31
CCL1P22362 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL1P22362 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL1P22362 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CCL1P22362 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL1P22362 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CCL1P22362 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL1P22362 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms