Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL9A1P20849 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL9A1P20849 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.58■□□□□ 0.08
COL9A1P20849 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC15.58■□□□□ 0.08
COL9A1P20849 AC084752.1-201ENST00000509766 622 ntBASIC15.58■□□□□ 0.08
COL9A1P20849 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC15.58■□□□□ 0.08
COL9A1P20849 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COL9A1P20849 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC15.58■□□□□ 0.08
COL9A1P20849 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.58■□□□□ 0.08
COL9A1P20849 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC15.58■□□□□ 0.08
COL9A1P20849 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC15.58■□□□□ 0.08
COL9A1P20849 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.58■□□□□ 0.08
COL9A1P20849 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC15.58■□□□□ 0.08
COL9A1P20849 AC073575.2-201ENST00000614212 627 ntBASIC15.58■□□□□ 0.08
COL9A1P20849 AP001002.3-201ENST00000623482 206 ntBASIC15.58■□□□□ 0.08
COL9A1P20849 NAP1L6-202ENST00000641404 1222 ntBASIC15.58■□□□□ 0.08
COL9A1P20849 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.58■□□□□ 0.08
COL9A1P20849 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.58■□□□□ 0.08
COL9A1P20849 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COL9A1P20849 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
COL9A1P20849 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.58■□□□□ 0.08
COL9A1P20849 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COL9A1P20849 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL9A1P20849 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL9A1P20849 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.58■□□□□ 0.08
COL9A1P20849 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL9A1P20849 LINC02447-202ENST00000501888 2146 ntBASIC15.58■□□□□ 0.08
COL9A1P20849 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL9A1P20849 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.58■□□□□ 0.08
COL9A1P20849 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
COL9A1P20849 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
COL9A1P20849 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.57■□□□□ 0.08
COL9A1P20849 AC022188.1-201ENST00000620960 1664 ntBASIC15.57■□□□□ 0.08
COL9A1P20849 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.57■□□□□ 0.08
COL9A1P20849 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
COL9A1P20849 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 AC148477.4-201ENST00000613430 1793 ntBASIC15.57■□□□□ 0.08
COL9A1P20849 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.57■□□□□ 0.08
COL9A1P20849 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.57■□□□□ 0.08
COL9A1P20849 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
COL9A1P20849 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
COL9A1P20849 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
COL9A1P20849 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC15.57■□□□□ 0.08
COL9A1P20849 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
COL9A1P20849 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 RPL14-203ENST00000416518 812 ntTSL 3 BASIC15.57■□□□□ 0.08
COL9A1P20849 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.57■□□□□ 0.08
COL9A1P20849 AL592076.1-201ENST00000424448 303 ntBASIC15.57■□□□□ 0.08
COL9A1P20849 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC15.57■□□□□ 0.08
COL9A1P20849 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC15.57■□□□□ 0.08
COL9A1P20849 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC15.57■□□□□ 0.08
COL9A1P20849 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.57■□□□□ 0.08
COL9A1P20849 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC15.57■□□□□ 0.08
COL9A1P20849 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.57■□□□□ 0.08
COL9A1P20849 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC15.57■□□□□ 0.08
COL9A1P20849 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC15.57■□□□□ 0.08
COL9A1P20849 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC15.57■□□□□ 0.08
COL9A1P20849 DUT-207ENST00000559416 635 ntTSL 2 BASIC15.57■□□□□ 0.08
COL9A1P20849 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC15.57■□□□□ 0.08
COL9A1P20849 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
COL9A1P20849 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
COL9A1P20849 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
COL9A1P20849 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.57■□□□□ 0.08
COL9A1P20849 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.57■□□□□ 0.08
COL9A1P20849 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
COL9A1P20849 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.57■□□□□ 0.08
COL9A1P20849 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL9A1P20849 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.56■□□□□ 0.08
COL9A1P20849 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
COL9A1P20849 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL9A1P20849 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.56■□□□□ 0.08
COL9A1P20849 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COL9A1P20849 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL9A1P20849 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL9A1P20849 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL9A1P20849 RN7SKP214-201ENST00000364208 315 ntBASIC15.56■□□□□ 0.08
COL9A1P20849 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
COL9A1P20849 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.56■□□□□ 0.08
COL9A1P20849 ACTBP8-201ENST00000403258 1108 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms