Protein–RNA interactions for Protein: P16383

GCFC2, GC-rich sequence DNA-binding factor 2, humanhuman

Known RBP Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2P16383 SLC25A47P1-201ENST00000531577 414 ntBASIC17.26■□□□□ 0.35
GCFC2P16383 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GCFC2P16383 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GCFC2P16383 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.26■□□□□ 0.35
GCFC2P16383 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
GCFC2P16383 BTNL10-201ENST00000595971 695 ntBASIC17.26■□□□□ 0.35
GCFC2P16383 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.26■□□□□ 0.35
GCFC2P16383 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GCFC2P16383 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.26■□□□□ 0.35
GCFC2P16383 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GCFC2P16383 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
GCFC2P16383 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
GCFC2P16383 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GCFC2P16383 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
GCFC2P16383 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GCFC2P16383 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GCFC2P16383 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GCFC2P16383 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GCFC2P16383 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GCFC2P16383 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GCFC2P16383 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.26■□□□□ 0.35
GCFC2P16383 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
GCFC2P16383 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.25■□□□□ 0.35
GCFC2P16383 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.25■□□□□ 0.35
GCFC2P16383 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.25■□□□□ 0.35
GCFC2P16383 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GCFC2P16383 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GCFC2P16383 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.25■□□□□ 0.35
GCFC2P16383 AC063926.2-201ENST00000623766 1308 ntBASIC17.25■□□□□ 0.35
GCFC2P16383 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GCFC2P16383 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.25■□□□□ 0.35
GCFC2P16383 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
GCFC2P16383 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
GCFC2P16383 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
GCFC2P16383 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
GCFC2P16383 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GCFC2P16383 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GCFC2P16383 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.25■□□□□ 0.35
GCFC2P16383 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GCFC2P16383 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GCFC2P16383 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GCFC2P16383 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
GCFC2P16383 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GCFC2P16383 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
GCFC2P16383 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.25■□□□□ 0.35
GCFC2P16383 TMEM14DP-201ENST00000422205 345 ntBASIC17.25■□□□□ 0.35
GCFC2P16383 AC005034.1-201ENST00000426657 489 ntBASIC17.25■□□□□ 0.35
GCFC2P16383 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.25■□□□□ 0.35
GCFC2P16383 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
GCFC2P16383 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GCFC2P16383 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.25■□□□□ 0.35
GCFC2P16383 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GCFC2P16383 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.25■□□□□ 0.35
GCFC2P16383 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.25■□□□□ 0.35
GCFC2P16383 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.25■□□□□ 0.35
GCFC2P16383 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.25■□□□□ 0.35
GCFC2P16383 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
GCFC2P16383 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.25■□□□□ 0.35
GCFC2P16383 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GCFC2P16383 AL035252.4-201ENST00000624174 288 ntBASIC17.25■□□□□ 0.35
GCFC2P16383 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.25■□□□□ 0.35
GCFC2P16383 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.25■□□□□ 0.35
GCFC2P16383 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GCFC2P16383 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GCFC2P16383 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GCFC2P16383 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
GCFC2P16383 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GCFC2P16383 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GCFC2P16383 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GCFC2P16383 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.25■□□□□ 0.35
GCFC2P16383 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.24■□□□□ 0.35
GCFC2P16383 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GCFC2P16383 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GCFC2P16383 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GCFC2P16383 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GCFC2P16383 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.24■□□□□ 0.35
GCFC2P16383 ACE3P-201ENST00000423435 1973 ntBASIC17.24■□□□□ 0.35
GCFC2P16383 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GCFC2P16383 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GCFC2P16383 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.24■□□□□ 0.35
GCFC2P16383 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.24■□□□□ 0.35
GCFC2P16383 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.24■□□□□ 0.35
GCFC2P16383 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.24■□□□□ 0.35
GCFC2P16383 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GCFC2P16383 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GCFC2P16383 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GCFC2P16383 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GCFC2P16383 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.24■□□□□ 0.35
GCFC2P16383 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
GCFC2P16383 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.24■□□□□ 0.35
GCFC2P16383 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.24■□□□□ 0.35
GCFC2P16383 EIF3FP3-201ENST00000434851 1086 ntBASIC17.24■□□□□ 0.35
GCFC2P16383 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GCFC2P16383 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.24■□□□□ 0.35
GCFC2P16383 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.24■□□□□ 0.35
GCFC2P16383 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
GCFC2P16383 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
GCFC2P16383 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.24■□□□□ 0.35
GCFC2P16383 AC106886.1-201ENST00000568660 600 ntBASIC17.24■□□□□ 0.35
GCFC2P16383 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms