Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.07■□□□□ 0.16
PDGFRAP16234 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFRAP16234 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFRAP16234 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFRAP16234 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFRAP16234 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.07■□□□□ 0.16
PDGFRAP16234 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFRAP16234 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFRAP16234 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PDGFRAP16234 ACE3P-201ENST00000423435 1973 ntBASIC16.07■□□□□ 0.16
PDGFRAP16234 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.07■□□□□ 0.16
PDGFRAP16234 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PDGFRAP16234 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
PDGFRAP16234 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFRAP16234 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.07■□□□□ 0.16
PDGFRAP16234 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.07■□□□□ 0.16
PDGFRAP16234 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PDGFRAP16234 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.07■□□□□ 0.16
PDGFRAP16234 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.07■□□□□ 0.16
PDGFRAP16234 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFRAP16234 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFRAP16234 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PDGFRAP16234 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PDGFRAP16234 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.06■□□□□ 0.16
PDGFRAP16234 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.06■□□□□ 0.16
PDGFRAP16234 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 AC098614.1-201ENST00000368528 745 ntBASIC16.06■□□□□ 0.16
PDGFRAP16234 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.06■□□□□ 0.16
PDGFRAP16234 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.06■□□□□ 0.16
PDGFRAP16234 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.06■□□□□ 0.16
PDGFRAP16234 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.06■□□□□ 0.16
PDGFRAP16234 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.06■□□□□ 0.16
PDGFRAP16234 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PDGFRAP16234 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.06■□□□□ 0.16
PDGFRAP16234 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
PDGFRAP16234 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.06■□□□□ 0.16
PDGFRAP16234 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
PDGFRAP16234 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFRAP16234 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PDGFRAP16234 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.05■□□□□ 0.16
PDGFRAP16234 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PDGFRAP16234 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.05■□□□□ 0.16
PDGFRAP16234 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFRAP16234 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFRAP16234 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
PDGFRAP16234 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFRAP16234 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PDGFRAP16234 MYO15B-237ENST00000642007 4893 ntBASIC16.05■□□□□ 0.16
PDGFRAP16234 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFRAP16234 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFRAP16234 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PDGFRAP16234 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PDGFRAP16234 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.05■□□□□ 0.16
PDGFRAP16234 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFRAP16234 AC093525.8-201ENST00000624099 1342 ntBASIC16.05■□□□□ 0.16
PDGFRAP16234 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.05■□□□□ 0.16
PDGFRAP16234 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.05■□□□□ 0.16
PDGFRAP16234 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFRAP16234 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFRAP16234 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFRAP16234 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFRAP16234 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.05■□□□□ 0.16
PDGFRAP16234 C1QBPP1-201ENST00000400117 770 ntBASIC16.05■□□□□ 0.16
PDGFRAP16234 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.05■□□□□ 0.16
PDGFRAP16234 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PDGFRAP16234 GAPDHP21-201ENST00000450301 1010 ntBASIC16.05■□□□□ 0.16
PDGFRAP16234 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFRAP16234 RN7SL752P-201ENST00000463779 287 ntBASIC16.05■□□□□ 0.16
PDGFRAP16234 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.05■□□□□ 0.16
PDGFRAP16234 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.05■□□□□ 0.16
PDGFRAP16234 AL359711.2-201ENST00000563105 872 ntBASIC16.05■□□□□ 0.16
PDGFRAP16234 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFRAP16234 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PDGFRAP16234 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
PDGFRAP16234 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.05■□□□□ 0.16
PDGFRAP16234 AC239800.4-201ENST00000603712 296 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms