Protein–RNA interactions for Protein: P16035

TIMP2, Metalloproteinase inhibitor 2, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2P16035 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.2■□□□□ 0.02
TIMP2P16035 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.2■□□□□ 0.02
TIMP2P16035 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.2■□□□□ 0.02
TIMP2P16035 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
TIMP2P16035 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP2P16035 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.2■□□□□ 0.02
TIMP2P16035 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP2P16035 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP2P16035 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP2P16035 LILRP1-201ENST00000444199 1370 ntBASIC15.2■□□□□ 0.02
TIMP2P16035 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
TIMP2P16035 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.2■□□□□ 0.02
TIMP2P16035 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TIMP2P16035 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.2■□□□□ 0.02
TIMP2P16035 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TIMP2P16035 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TIMP2P16035 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TIMP2P16035 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.19■□□□□ 0.02
TIMP2P16035 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TIMP2P16035 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.19■□□□□ 0.02
TIMP2P16035 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.19■□□□□ 0.02
TIMP2P16035 AC012497.1-201ENST00000429392 575 ntBASIC15.19■□□□□ 0.02
TIMP2P16035 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.19■□□□□ 0.02
TIMP2P16035 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.19■□□□□ 0.02
TIMP2P16035 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.19■□□□□ 0.02
TIMP2P16035 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 AL033527.4-201ENST00000641026 673 ntBASIC15.19■□□□□ 0.02
TIMP2P16035 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
TIMP2P16035 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TIMP2P16035 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.19■□□□□ 0.02
TIMP2P16035 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.19■□□□□ 0.02
TIMP2P16035 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.19■□□□□ 0.02
TIMP2P16035 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP2P16035 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TIMP2P16035 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TIMP2P16035 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.19■□□□□ 0.02
TIMP2P16035 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP2P16035 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.18■□□□□ 0.02
TIMP2P16035 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.18■□□□□ 0.02
TIMP2P16035 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP2P16035 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP2P16035 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP2P16035 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP2P16035 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TIMP2P16035 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.18■□□□□ 0.02
TIMP2P16035 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TIMP2P16035 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP2P16035 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.18■□□□□ 0.02
TIMP2P16035 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP2P16035 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TIMP2P16035 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
TIMP2P16035 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP2P16035 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.18■□□□□ 0.02
TIMP2P16035 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP2P16035 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.18■□□□□ 0.02
TIMP2P16035 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP2P16035 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP2P16035 LST1-206ENST00000376090 689 ntTSL 2 BASIC15.18■□□□□ 0.02
TIMP2P16035 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP2P16035 LST1-209ENST00000376096 565 ntTSL 2 BASIC15.18■□□□□ 0.02
TIMP2P16035 LST1-210ENST00000376099 610 ntTSL 2 BASIC15.18■□□□□ 0.02
TIMP2P16035 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP2P16035 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP2P16035 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TIMP2P16035 LST1-214ENST00000418507 726 ntTSL 2 BASIC15.18■□□□□ 0.02
TIMP2P16035 FAM21FP-201ENST00000426241 1131 ntBASIC15.18■□□□□ 0.02
TIMP2P16035 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.18■□□□□ 0.02
TIMP2P16035 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP2P16035 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.18■□□□□ 0.02
TIMP2P16035 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP2P16035 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.18■□□□□ 0.02
TIMP2P16035 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.18■□□□□ 0.02
TIMP2P16035 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP2P16035 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.18■□□□□ 0.02
TIMP2P16035 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP2P16035 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP2P16035 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP2P16035 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms