Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
COL11A1P12107 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.97■□□□□ 0.31
COL11A1P12107 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
COL11A1P12107 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL11A1P12107 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL11A1P12107 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL11A1P12107 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.97■□□□□ 0.31
COL11A1P12107 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.97■□□□□ 0.31
COL11A1P12107 AC027237.1-201ENST00000560942 655 ntBASIC16.97■□□□□ 0.31
COL11A1P12107 MIR3677-201ENST00000578964 60 ntBASIC16.97■□□□□ 0.31
COL11A1P12107 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.97■□□□□ 0.31
COL11A1P12107 MIR6720-201ENST00000611664 98 ntBASIC16.97■□□□□ 0.31
COL11A1P12107 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL11A1P12107 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL11A1P12107 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL11A1P12107 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL11A1P12107 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL11A1P12107 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.97■□□□□ 0.31
COL11A1P12107 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.97■□□□□ 0.31
COL11A1P12107 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
COL11A1P12107 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.97■□□□□ 0.31
COL11A1P12107 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.97■□□□□ 0.31
COL11A1P12107 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
COL11A1P12107 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL11A1P12107 LINC01165-201ENST00000445190 1623 ntBASIC16.97■□□□□ 0.31
COL11A1P12107 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL11A1P12107 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL11A1P12107 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL11A1P12107 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL11A1P12107 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.96■□□□□ 0.31
COL11A1P12107 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
COL11A1P12107 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL11A1P12107 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL11A1P12107 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL11A1P12107 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.96■□□□□ 0.31
COL11A1P12107 AC069218.1-201ENST00000435269 762 ntBASIC16.96■□□□□ 0.31
COL11A1P12107 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.96■□□□□ 0.31
COL11A1P12107 NDUFS6P1-201ENST00000485187 316 ntBASIC16.96■□□□□ 0.31
COL11A1P12107 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL11A1P12107 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL11A1P12107 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.96■□□□□ 0.31
COL11A1P12107 AC012044.1-201ENST00000603431 297 ntBASIC16.96■□□□□ 0.31
COL11A1P12107 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.96■□□□□ 0.31
COL11A1P12107 AC015909.3-201ENST00000572855 1794 ntBASIC16.96■□□□□ 0.31
COL11A1P12107 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
COL11A1P12107 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL11A1P12107 AL162727.3-201ENST00000635661 2787 ntBASIC16.96■□□□□ 0.31
COL11A1P12107 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
COL11A1P12107 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
COL11A1P12107 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL11A1P12107 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL11A1P12107 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL11A1P12107 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL11A1P12107 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.96■□□□□ 0.31
COL11A1P12107 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL11A1P12107 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL11A1P12107 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL11A1P12107 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL11A1P12107 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
COL11A1P12107 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL11A1P12107 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL11A1P12107 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
COL11A1P12107 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.96■□□□□ 0.3
COL11A1P12107 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
COL11A1P12107 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.96■□□□□ 0.3
COL11A1P12107 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.96■□□□□ 0.3
COL11A1P12107 RN7SL163P-201ENST00000583100 276 ntBASIC16.96■□□□□ 0.3
COL11A1P12107 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.96■□□□□ 0.3
COL11A1P12107 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.96■□□□□ 0.3
COL11A1P12107 AC133540.1-201ENST00000620845 1019 ntBASIC16.96■□□□□ 0.3
COL11A1P12107 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL11A1P12107 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL11A1P12107 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.95■□□□□ 0.3
COL11A1P12107 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL11A1P12107 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.95■□□□□ 0.3
COL11A1P12107 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.95■□□□□ 0.3
COL11A1P12107 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
COL11A1P12107 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.95■□□□□ 0.3
COL11A1P12107 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL11A1P12107 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.95■□□□□ 0.3
COL11A1P12107 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL11A1P12107 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL11A1P12107 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.95■□□□□ 0.3
COL11A1P12107 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.95■□□□□ 0.3
COL11A1P12107 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.95■□□□□ 0.3
COL11A1P12107 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.95■□□□□ 0.3
COL11A1P12107 AC090857.1-201ENST00000527400 390 ntBASIC16.95■□□□□ 0.3
COL11A1P12107 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.95■□□□□ 0.3
COL11A1P12107 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.95■□□□□ 0.3
COL11A1P12107 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.95■□□□□ 0.3
COL11A1P12107 PRKXP1-201ENST00000561423 1122 ntBASIC16.95■□□□□ 0.3
COL11A1P12107 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.95■□□□□ 0.3
COL11A1P12107 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.95■□□□□ 0.3
COL11A1P12107 AC020922.3-201ENST00000595064 547 ntBASIC16.95■□□□□ 0.3
COL11A1P12107 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
COL11A1P12107 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.95■□□□□ 0.3
COL11A1P12107 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
COL11A1P12107 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL11A1P12107 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.95■□□□□ 0.3
COL11A1P12107 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms