Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
APPP05067 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
APPP05067 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
APPP05067 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
APPP05067 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
APPP05067 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
APPP05067 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
APPP05067 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
APPP05067 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.39■□□□□ 0.53
APPP05067 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
APPP05067 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
APPP05067 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
APPP05067 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.38■□□□□ 0.53
APPP05067 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.38■□□□□ 0.53
APPP05067 AC007787.1-201ENST00000588095 1583 ntBASIC18.38■□□□□ 0.53
APPP05067 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
APPP05067 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.38■□□□□ 0.53
APPP05067 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.38■□□□□ 0.53
APPP05067 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.38■□□□□ 0.53
APPP05067 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
APPP05067 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.38■□□□□ 0.53
APPP05067 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.38■□□□□ 0.53
APPP05067 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.38■□□□□ 0.53
APPP05067 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.38■□□□□ 0.53
APPP05067 SAMD11P1-201ENST00000571429 661 ntBASIC18.38■□□□□ 0.53
APPP05067 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.38■□□□□ 0.53
APPP05067 AC015936.2-201ENST00000593177 259 ntBASIC18.38■□□□□ 0.53
APPP05067 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.38■□□□□ 0.53
APPP05067 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.38■□□□□ 0.53
APPP05067 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
APPP05067 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.38■□□□□ 0.53
APPP05067 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.38■□□□□ 0.53
APPP05067 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
APPP05067 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
APPP05067 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.38■□□□□ 0.53
APPP05067 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.38■□□□□ 0.53
APPP05067 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APPP05067 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
APPP05067 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APPP05067 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
APPP05067 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APPP05067 AC138035.3-201ENST00000622706 2791 ntBASIC18.37■□□□□ 0.53
APPP05067 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
APPP05067 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APPP05067 AC023024.2-201ENST00000623561 1993 ntBASIC18.37■□□□□ 0.53
APPP05067 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
APPP05067 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
APPP05067 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APPP05067 AL359258.3-201ENST00000622910 2331 ntBASIC18.37■□□□□ 0.53
APPP05067 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.37■□□□□ 0.53
APPP05067 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APPP05067 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APPP05067 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
APPP05067 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.37■□□□□ 0.53
APPP05067 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.37■□□□□ 0.53
APPP05067 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
APPP05067 SLC25A47P1-201ENST00000531577 414 ntBASIC18.37■□□□□ 0.53
APPP05067 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.37■□□□□ 0.53
APPP05067 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
APPP05067 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.37■□□□□ 0.53
APPP05067 AL645728.2-202ENST00000641679 227 ntBASIC18.37■□□□□ 0.53
APPP05067 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APPP05067 AC134312.5-201ENST00000568031 1313 ntBASIC18.37■□□□□ 0.53
APPP05067 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APPP05067 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APPP05067 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
APPP05067 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APPP05067 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.37■□□□□ 0.53
APPP05067 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.37■□□□□ 0.53
APPP05067 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
APPP05067 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.37■□□□□ 0.53
APPP05067 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APPP05067 MYO15B-237ENST00000642007 4893 ntBASIC18.37■□□□□ 0.53
APPP05067 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APPP05067 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms