Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TRGV3P03979 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.09□□□□□ -0.47
TRGV3P03979 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.09□□□□□ -0.47
TRGV3P03979 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TRGV3P03979 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.09□□□□□ -0.47
TRGV3P03979 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.09□□□□□ -0.47
TRGV3P03979 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
TRGV3P03979 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
TRGV3P03979 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.09□□□□□ -0.47
TRGV3P03979 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TRGV3P03979 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TRGV3P03979 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.08□□□□□ -0.47
TRGV3P03979 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.47
TRGV3P03979 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
TRGV3P03979 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TRGV3P03979 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TRGV3P03979 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
TRGV3P03979 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.08□□□□□ -0.48
TRGV3P03979 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV3P03979 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
TRGV3P03979 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV3P03979 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV3P03979 CRB3P1-201ENST00000449338 276 ntBASIC12.08□□□□□ -0.48
TRGV3P03979 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV3P03979 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.08□□□□□ -0.48
TRGV3P03979 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.08□□□□□ -0.48
TRGV3P03979 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.08□□□□□ -0.48
TRGV3P03979 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.08□□□□□ -0.48
TRGV3P03979 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.08□□□□□ -0.48
TRGV3P03979 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
TRGV3P03979 AC112693.3-201ENST00000624819 1983 ntBASIC12.08□□□□□ -0.48
TRGV3P03979 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV3P03979 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TRGV3P03979 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.08□□□□□ -0.48
TRGV3P03979 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV3P03979 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 AC138969.2-201ENST00000532739 9932 ntBASIC12.07□□□□□ -0.48
TRGV3P03979 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
TRGV3P03979 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
TRGV3P03979 CICP11-201ENST00000434745 2827 ntBASIC12.07□□□□□ -0.48
TRGV3P03979 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV3P03979 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
TRGV3P03979 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
TRGV3P03979 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
TRGV3P03979 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
TRGV3P03979 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV3P03979 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.07□□□□□ -0.48
TRGV3P03979 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms