Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-ND3P03897 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.68■□□□□ 0.1
MT-ND3P03897 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-ND3P03897 AL390754.1-201ENST00000619088 582 ntBASIC15.68■□□□□ 0.1
MT-ND3P03897 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
MT-ND3P03897 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-ND3P03897 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
MT-ND3P03897 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
MT-ND3P03897 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
MT-ND3P03897 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
MT-ND3P03897 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.67■□□□□ 0.1
MT-ND3P03897 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
MT-ND3P03897 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.67■□□□□ 0.1
MT-ND3P03897 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.67■□□□□ 0.1
MT-ND3P03897 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
MT-ND3P03897 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.67■□□□□ 0.1
MT-ND3P03897 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.67■□□□□ 0.1
MT-ND3P03897 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.67■□□□□ 0.1
MT-ND3P03897 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.67■□□□□ 0.1
MT-ND3P03897 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.67■□□□□ 0.1
MT-ND3P03897 AC136604.1-201ENST00000418535 575 ntBASIC15.67■□□□□ 0.1
MT-ND3P03897 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.67■□□□□ 0.1
MT-ND3P03897 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.67■□□□□ 0.1
MT-ND3P03897 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MT-ND3P03897 AC097493.3-201ENST00000509725 367 ntBASIC15.67■□□□□ 0.1
MT-ND3P03897 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.67■□□□□ 0.1
MT-ND3P03897 MIR4453-201ENST00000584019 89 ntBASIC15.67■□□□□ 0.1
MT-ND3P03897 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.67■□□□□ 0.1
MT-ND3P03897 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.67■□□□□ 0.1
MT-ND3P03897 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.67■□□□□ 0.1
MT-ND3P03897 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.67■□□□□ 0.1
MT-ND3P03897 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 ACE3P-201ENST00000423435 1973 ntBASIC15.67■□□□□ 0.1
MT-ND3P03897 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.67■□□□□ 0.1
MT-ND3P03897 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.67■□□□□ 0.1
MT-ND3P03897 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.67■□□□□ 0.1
MT-ND3P03897 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.67■□□□□ 0.1
MT-ND3P03897 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
MT-ND3P03897 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND3P03897 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND3P03897 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND3P03897 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND3P03897 AC084364.1-201ENST00000551967 1556 ntBASIC15.66■□□□□ 0.1
MT-ND3P03897 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND3P03897 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND3P03897 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
MT-ND3P03897 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND3P03897 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND3P03897 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND3P03897 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.66■□□□□ 0.1
MT-ND3P03897 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND3P03897 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.66■□□□□ 0.1
MT-ND3P03897 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND3P03897 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND3P03897 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND3P03897 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND3P03897 AC241585.1-201ENST00000433527 519 ntBASIC15.66■□□□□ 0.1
MT-ND3P03897 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.66■□□□□ 0.1
MT-ND3P03897 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.66■□□□□ 0.1
MT-ND3P03897 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND3P03897 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.66■□□□□ 0.1
MT-ND3P03897 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.66■□□□□ 0.1
MT-ND3P03897 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.66■□□□□ 0.1
MT-ND3P03897 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND3P03897 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms