Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC026740.1-201ENST00000607068 791 ntBASIC16.47■□□□□ 0.23
CHRNA1P02708 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.47■□□□□ 0.23
CHRNA1P02708 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA1P02708 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA1P02708 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA1P02708 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA1P02708 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA1P02708 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA1P02708 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CHRNA1P02708 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHRNA1P02708 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA1P02708 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA1P02708 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA1P02708 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CHRNA1P02708 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA1P02708 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNA1P02708 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CHRNA1P02708 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA1P02708 E2F3P2-201ENST00000447755 1422 ntBASIC16.46■□□□□ 0.23
CHRNA1P02708 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA1P02708 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA1P02708 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.46■□□□□ 0.23
CHRNA1P02708 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNA1P02708 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA1P02708 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA1P02708 SHC1P1-201ENST00000425230 1745 ntBASIC16.46■□□□□ 0.23
CHRNA1P02708 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA1P02708 AC091046.1-201ENST00000331871 207 ntBASIC16.46■□□□□ 0.23
CHRNA1P02708 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CHRNA1P02708 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.46■□□□□ 0.23
CHRNA1P02708 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA1P02708 ACTG1P2-201ENST00000415776 1125 ntBASIC16.46■□□□□ 0.23
CHRNA1P02708 ACTG1P11-201ENST00000425411 1125 ntBASIC16.46■□□□□ 0.23
CHRNA1P02708 AL133466.1-201ENST00000447582 150 ntBASIC16.46■□□□□ 0.23
CHRNA1P02708 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.46■□□□□ 0.23
CHRNA1P02708 RN7SL11P-201ENST00000471305 293 ntBASIC16.46■□□□□ 0.23
CHRNA1P02708 RN7SL720P-201ENST00000488178 304 ntBASIC16.46■□□□□ 0.23
CHRNA1P02708 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNA1P02708 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA1P02708 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNA1P02708 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CHRNA1P02708 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.46■□□□□ 0.23
CHRNA1P02708 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CHRNA1P02708 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.46■□□□□ 0.23
CHRNA1P02708 AC091544.8-201ENST00000619490 361 ntBASIC16.46■□□□□ 0.23
CHRNA1P02708 AC068587.8-201ENST00000641239 219 ntBASIC16.46■□□□□ 0.23
CHRNA1P02708 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNA1P02708 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CHRNA1P02708 AC008132.1-202ENST00000342005 1389 ntBASIC16.46■□□□□ 0.23
CHRNA1P02708 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CHRNA1P02708 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNA1P02708 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA1P02708 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
CHRNA1P02708 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA1P02708 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA1P02708 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA1P02708 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.46■□□□□ 0.23
CHRNA1P02708 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA1P02708 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.22
CHRNA1P02708 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHRNA1P02708 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CHRNA1P02708 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
CHRNA1P02708 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.46■□□□□ 0.22
CHRNA1P02708 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHRNA1P02708 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHRNA1P02708 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA1P02708 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHRNA1P02708 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHRNA1P02708 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA1P02708 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA1P02708 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CHRNA1P02708 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.45■□□□□ 0.22
CHRNA1P02708 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA1P02708 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.45■□□□□ 0.22
CHRNA1P02708 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CHRNA1P02708 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA1P02708 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA1P02708 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHRNA1P02708 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA1P02708 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA1P02708 AC010141.1-201ENST00000411585 623 ntBASIC16.45■□□□□ 0.22
CHRNA1P02708 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.45■□□□□ 0.22
CHRNA1P02708 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA1P02708 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.45■□□□□ 0.22
CHRNA1P02708 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA1P02708 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.45■□□□□ 0.22
CHRNA1P02708 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.45■□□□□ 0.22
CHRNA1P02708 AC106794.1-201ENST00000506935 792 ntBASIC16.45■□□□□ 0.22
CHRNA1P02708 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.45■□□□□ 0.22
CHRNA1P02708 DUX4L46-201ENST00000566845 751 ntBASIC16.45■□□□□ 0.22
CHRNA1P02708 RN7SL574P-201ENST00000581512 297 ntBASIC16.45■□□□□ 0.22
CHRNA1P02708 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA1P02708 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA1P02708 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.45■□□□□ 0.22
CHRNA1P02708 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNA1P02708 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA1P02708 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA1P02708 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA1P02708 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNA1P02708 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms