Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CROCCP1-201ENST00000426910 5675 ntBASIC15.13■□□□□ 0.01
PDGFBP01127 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFBP01127 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PDGFBP01127 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
PDGFBP01127 ACTBP7-201ENST00000418351 1124 ntBASIC15.13■□□□□ 0.01
PDGFBP01127 PSMD4P1-201ENST00000433951 1109 ntBASIC15.13■□□□□ 0.01
PDGFBP01127 LINC00634-202ENST00000505157 222 ntBASIC15.13■□□□□ 0.01
PDGFBP01127 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.13■□□□□ 0.01
PDGFBP01127 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
PDGFBP01127 CR383656.3-201ENST00000551315 183 ntBASIC15.13■□□□□ 0.01
PDGFBP01127 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.13■□□□□ 0.01
PDGFBP01127 AC093752.3-201ENST00000567343 901 ntBASIC15.13■□□□□ 0.01
PDGFBP01127 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFBP01127 AC009884.2-201ENST00000603110 324 ntBASIC15.13■□□□□ 0.01
PDGFBP01127 AC005041.3-201ENST00000606287 649 ntBASIC15.13■□□□□ 0.01
PDGFBP01127 AC018695.6-201ENST00000614011 534 ntBASIC15.13■□□□□ 0.01
PDGFBP01127 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFBP01127 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFBP01127 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PDGFBP01127 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFBP01127 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFBP01127 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFBP01127 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFBP01127 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
PDGFBP01127 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFBP01127 LINC01165-201ENST00000445190 1623 ntBASIC15.13■□□□□ 0.01
PDGFBP01127 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
PDGFBP01127 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFBP01127 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.13■□□□□ 0.01
PDGFBP01127 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PDGFBP01127 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.13■□□□□ 0.01
PDGFBP01127 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFBP01127 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.13■□□□□ 0.01
PDGFBP01127 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PDGFBP01127 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC15.12■□□□□ 0.01
PDGFBP01127 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.12■□□□□ 0.01
PDGFBP01127 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
PDGFBP01127 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PDGFBP01127 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.12■□□□□ 0.01
PDGFBP01127 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC15.12■□□□□ 0.01
PDGFBP01127 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC15.12■□□□□ 0.01
PDGFBP01127 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PDGFBP01127 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PDGFBP01127 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC15.12■□□□□ 0.01
PDGFBP01127 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.12■□□□□ 0.01
PDGFBP01127 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.12■□□□□ 0.01
PDGFBP01127 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 AC007326.1-201ENST00000604539 458 ntBASIC15.12■□□□□ 0.01
PDGFBP01127 MIR6720-201ENST00000611664 98 ntBASIC15.12■□□□□ 0.01
PDGFBP01127 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PDGFBP01127 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 AC011676.5-201ENST00000624864 2660 ntBASIC15.12■□□□□ 0.01
PDGFBP01127 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PDGFBP01127 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PDGFBP01127 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.12■□□□□ 0.01
PDGFBP01127 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.12■□□□□ 0.01
PDGFBP01127 AC006058.4-201ENST00000624016 1670 ntBASIC15.12■□□□□ 0.01
PDGFBP01127 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.12■□□□□ 0.01
PDGFBP01127 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PDGFBP01127 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 AP003680.1-201ENST00000598970 3660 ntBASIC15.12■□□□□ 0.01
PDGFBP01127 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFBP01127 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFBP01127 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.11■□□□□ 0.01
PDGFBP01127 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PDGFBP01127 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFBP01127 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PDGFBP01127 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFBP01127 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.11■□□□□ 0.01
PDGFBP01127 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.11■□□□□ 0.01
PDGFBP01127 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.11■□□□□ 0.01
PDGFBP01127 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFBP01127 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFBP01127 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
PDGFBP01127 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC15.11■□□□□ 0.01
PDGFBP01127 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC15.11■□□□□ 0.01
PDGFBP01127 NUDT4P2-201ENST00000578341 546 ntBASIC15.11■□□□□ 0.01
PDGFBP01127 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC15.11■□□□□ 0.01
PDGFBP01127 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
PDGFBP01127 AC073592.2-201ENST00000623062 780 ntBASIC15.11■□□□□ 0.01
PDGFBP01127 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.11■□□□□ 0.01
PDGFBP01127 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms