Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTN3O95197 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTN3O95197 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RTN3O95197 GRK6P1-201ENST00000400595 1711 ntBASIC16.15■□□□□ 0.18
RTN3O95197 AC016694.1-201ENST00000434179 700 ntBASIC16.15■□□□□ 0.18
RTN3O95197 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RTN3O95197 KLF2P4-201ENST00000451959 1225 ntBASIC16.15■□□□□ 0.18
RTN3O95197 AC106760.1-201ENST00000508690 800 ntBASIC16.15■□□□□ 0.18
RTN3O95197 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RTN3O95197 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.15■□□□□ 0.18
RTN3O95197 SAMD11P1-201ENST00000571429 661 ntBASIC16.15■□□□□ 0.18
RTN3O95197 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.15■□□□□ 0.18
RTN3O95197 AC007787.1-201ENST00000588095 1583 ntBASIC16.15■□□□□ 0.18
RTN3O95197 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.15■□□□□ 0.18
RTN3O95197 AC133552.6-201ENST00000613406 534 ntBASIC16.15■□□□□ 0.18
RTN3O95197 PRSS30P-206ENST00000641773 873 ntBASIC16.15■□□□□ 0.18
RTN3O95197 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.15■□□□□ 0.18
RTN3O95197 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RTN3O95197 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RTN3O95197 AC090616.6-203ENST00000579186 1945 ntBASIC16.15■□□□□ 0.18
RTN3O95197 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.15■□□□□ 0.18
RTN3O95197 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RTN3O95197 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTN3O95197 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTN3O95197 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTN3O95197 KRT8P35-201ENST00000483942 1338 ntBASIC16.15■□□□□ 0.18
RTN3O95197 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTN3O95197 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTN3O95197 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RTN3O95197 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RTN3O95197 PDIA3P1-201ENST00000471856 1510 ntBASIC16.14■□□□□ 0.18
RTN3O95197 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RTN3O95197 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN3O95197 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RTN3O95197 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.14■□□□□ 0.17
RTN3O95197 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RTN3O95197 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
RTN3O95197 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN3O95197 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
RTN3O95197 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN3O95197 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.14■□□□□ 0.17
RTN3O95197 AC009090.5-201ENST00000624886 2285 ntBASIC16.14■□□□□ 0.17
RTN3O95197 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.14■□□□□ 0.17
RTN3O95197 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN3O95197 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN3O95197 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RTN3O95197 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN3O95197 C2orf27AP3-201ENST00000434123 579 ntBASIC16.14■□□□□ 0.17
RTN3O95197 AC007551.1-201ENST00000457394 519 ntBASIC16.14■□□□□ 0.17
RTN3O95197 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.14■□□□□ 0.17
RTN3O95197 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.14■□□□□ 0.17
RTN3O95197 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.14■□□□□ 0.17
RTN3O95197 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RTN3O95197 AL354718.3-201ENST00000616414 581 ntBASIC16.14■□□□□ 0.17
RTN3O95197 CR382287.1-201ENST00000623954 586 ntBASIC16.14■□□□□ 0.17
RTN3O95197 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN3O95197 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.14■□□□□ 0.17
RTN3O95197 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.14■□□□□ 0.17
RTN3O95197 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN3O95197 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.14■□□□□ 0.17
RTN3O95197 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN3O95197 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN3O95197 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.14■□□□□ 0.17
RTN3O95197 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.14■□□□□ 0.17
RTN3O95197 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.14■□□□□ 0.17
RTN3O95197 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.14■□□□□ 0.17
RTN3O95197 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RTN3O95197 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RTN3O95197 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN3O95197 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RTN3O95197 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.14■□□□□ 0.17
RTN3O95197 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN3O95197 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN3O95197 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.14■□□□□ 0.17
RTN3O95197 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
RTN3O95197 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN3O95197 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC16.13■□□□□ 0.17
RTN3O95197 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN3O95197 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN3O95197 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN3O95197 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.13■□□□□ 0.17
RTN3O95197 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN3O95197 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RTN3O95197 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RTN3O95197 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN3O95197 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN3O95197 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN3O95197 AC023908.3-201ENST00000564211 3047 ntBASIC16.13■□□□□ 0.17
RTN3O95197 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN3O95197 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN3O95197 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.13■□□□□ 0.17
RTN3O95197 ACTBP8-201ENST00000403258 1108 ntBASIC16.13■□□□□ 0.17
RTN3O95197 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RTN3O95197 KLF2P2-201ENST00000416807 1039 ntBASIC16.13■□□□□ 0.17
RTN3O95197 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN3O95197 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
RTN3O95197 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.13■□□□□ 0.17
RTN3O95197 FTH1P14-201ENST00000482930 551 ntBASIC16.13■□□□□ 0.17
RTN3O95197 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.13■□□□□ 0.17
RTN3O95197 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms