Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.43■□□□□ 0.06
GPC4O75487 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.43■□□□□ 0.06
GPC4O75487 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.43■□□□□ 0.06
GPC4O75487 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.43■□□□□ 0.06
GPC4O75487 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.43■□□□□ 0.06
GPC4O75487 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.42■□□□□ 0.06
GPC4O75487 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.42■□□□□ 0.06
GPC4O75487 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.42■□□□□ 0.06
GPC4O75487 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 AGAP7P-201ENST00000582299 2062 ntBASIC15.42■□□□□ 0.06
GPC4O75487 AGAP14-201ENST00000624701 2060 ntBASIC15.42■□□□□ 0.06
GPC4O75487 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
GPC4O75487 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
GPC4O75487 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.42■□□□□ 0.06
GPC4O75487 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.42■□□□□ 0.06
GPC4O75487 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
GPC4O75487 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
GPC4O75487 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
GPC4O75487 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.42■□□□□ 0.06
GPC4O75487 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.42■□□□□ 0.06
GPC4O75487 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.42■□□□□ 0.06
GPC4O75487 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.42■□□□□ 0.06
GPC4O75487 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
GPC4O75487 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.42■□□□□ 0.06
GPC4O75487 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
GPC4O75487 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
GPC4O75487 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.42■□□□□ 0.06
GPC4O75487 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.42■□□□□ 0.06
GPC4O75487 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
GPC4O75487 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.42■□□□□ 0.06
GPC4O75487 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 AC126365.1-201ENST00000578585 1514 ntBASIC15.42■□□□□ 0.06
GPC4O75487 CICP23-201ENST00000605013 2741 ntBASIC15.42■□□□□ 0.06
GPC4O75487 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.42■□□□□ 0.06
GPC4O75487 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.42■□□□□ 0.06
GPC4O75487 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
GPC4O75487 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.42■□□□□ 0.06
GPC4O75487 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GPC4O75487 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
GPC4O75487 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.41■□□□□ 0.06
GPC4O75487 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
GPC4O75487 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
GPC4O75487 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
GPC4O75487 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.41■□□□□ 0.06
GPC4O75487 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
GPC4O75487 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
GPC4O75487 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
GPC4O75487 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GPC4O75487 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GPC4O75487 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
GPC4O75487 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GPC4O75487 AC007292.2-201ENST00000593524 1812 ntBASIC15.41■□□□□ 0.06
GPC4O75487 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.41■□□□□ 0.06
GPC4O75487 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GPC4O75487 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.41■□□□□ 0.06
GPC4O75487 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GPC4O75487 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GPC4O75487 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
GPC4O75487 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GPC4O75487 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.41■□□□□ 0.06
GPC4O75487 FAM8A3P-201ENST00000427218 844 ntBASIC15.41■□□□□ 0.06
GPC4O75487 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.41■□□□□ 0.06
GPC4O75487 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
GPC4O75487 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.41■□□□□ 0.06
GPC4O75487 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.41■□□□□ 0.06
GPC4O75487 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.41■□□□□ 0.06
GPC4O75487 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GPC4O75487 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GPC4O75487 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
GPC4O75487 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GPC4O75487 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.41■□□□□ 0.06
GPC4O75487 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GPC4O75487 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GPC4O75487 AC087386.2-201ENST00000623212 4637 ntBASIC15.41■□□□□ 0.06
GPC4O75487 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms